it looks like there is an (incorrect) connection in the wm.mgz from the
temporal lobe across the insula. The data also looks really noisy - what
is the acquisition? You'll need to erase some stuff form the wm.mgz I
think.
On Fri, 13 Apr 2007, Derin Cobia wrote:
Here is a pic of the inflated.nofix, how do I know what to edit? I've
checked the wm.mgz and it looks fine (at least I can't see any errors).
Maybe I'm missing something, I've attached a shot of it as well. Thanks.
-Derin
look at the ?h.inflated.nofix to see what is causing the defect, and
correct the wm.mgz manually to remove it. Jenni: can you point Derin at
the
appropriate wiki page?
thanks,
Bruce
On Fri, 13 Apr 2007, Derin Cobia wrote:
The ?h.orig.nofix looks ok, meaning it follows the white-gray boundary
appropriately. What should I try next?
-Derin
this is probably a topology fixing problem. Look at the ?h.orig.nofix
and
see how it is
On Fri, 13 Apr 2007, Derin Cobia wrote:
Did you mean wm.mgz? It looks fine. The orig surface is not good
either.
Here's a pic.
-Derin
Hi Derin,
What does the orig surface look like? and the wm? Are those
correct?
Jenni
On Fri, 13 Apr 2007, Derin Cobia wrote:
I have two subjects where the white surface does not follow the
gray-white
gradient (see attached pic for example). Is there any way to fix
this?
I'm assuming it has to do with the limitations of my scan too (it's
FLASH
data). I'm running 3.0.4, thanks.
-Derin
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