That was it. Thanks so much. Just added the unsetenv line to my .cshrc
file.
Cliff
------------------
Clifford Smith, PhD
Assistant Professor of Behavioral Sciences
Rush University Medical Center
312.942.2893
> From: Nick Schmansky <[EMAIL PROTECTED]>
> Date: Tue, 21 Mar 2006 12:28:43 -0500
> To: "Clifford A. Smith, PhD" <[EMAIL PROTECTED]>
> Cc: Freesurfer Mailing List <freesurfer@nmr.mgh.harvard.edu>
> Subject: Re: [Freesurfer] FSL/Freesurfer
>
> Clifford,
>
> After sourcing SetUpFreeSurfer.csh, but before starting FSL, type this:
>
> unsetenv TCLLIBPATH
>
> This should take care of the problem you are seeing. You may want to
> include that line in your SetUpFreeSurfer.csh file.
>
> Nick
>
> On Tue, 2006-03-21 at 10:36 -0600, Clifford A. Smith, PhD wrote:
>> I believe that I have read a post on this in the past, but I was
>> unable to run a search. I have FSL configured to startup in X11
>> without a problem. Also can run Freesurfer (source
>> SetupFreeSurfer.csh) without a problem. But FSL will not work after I
>> have ran the source SetUpFreeSurfer.csh command. The following is the
>> error output. Any work around besides run separate X11 windows for
>> FSL and Freesurfer?
>>
>>
>> [Clifford-Smiths-Computer:~] Cliff% source SetUpFreeSurfer.csh
>> Setting up environment for FreeSurfer/FS-FAST (and FSL)
>> FREESURFER_HOME /Users/Cliff/Imaging/freesurfer
>> FSFAST_HOME /Users/Cliff/Imaging/freesurfer/fsfast
>> SUBJECTS_DIR /Users/Cliff/Imaging/freesurfer/subjects
>> FUNCTIONALS_DIR /Users/Cliff/Imaging/freesurfer/sessions
>> MINC_BIN_DIR /Users/Cliff/Imaging/freesurfer/mni/bin
>> MINC_LIB_DIR /Users/Cliff/Imaging/freesurfer/mni/lib
>> PERL5LIB
>> /Users/Cliff/Imaging/freesurfer/mni/lib/../System/Library/Perl/5
>> .8.6
>> GSL_DIR /Users/Cliff/Imaging/freesurfer/lib/gsl
>> QTDIR /Users/Cliff/Imaging/freesurfer/lib/qt
>> TCLLIBPATH /Users/Cliff/Imaging/freesurfer/lib/tcltktixblt/lib
>> MISC_LIB /Users/Cliff/Imaging/freesurfer/lib/misc/lib
>> FSL_DIR /users/cliff/fsl
>> [Clifford-Smiths-Computer:~] Cliff% fsl
>> Error in startup script: no suitable image found. Did find:
>> /Users/Cliff/Imaging/freesurfer/lib/tcltktixblt/lib/libtix8.1.8.4.a:
>> unknown file type, first eight bytes: 0
>> x21 0x3C 0x61 0x72 0x63 0x68 0x3E 0x0A
>> /Users/Cliff/Imaging/freesurfer/lib/tcltktixblt/lib/libtix8.1.8.4.a:
>> unknown file type, first eight bytes: 0
>> x21 0x3C 0x61 0x72 0x63 0x68 0x3E 0x0A
>> while executing
>> "load /Users/Cliff/Imaging/freesurfer/lib/tcltktixblt/lib/libtix8.1.8.4.a
>> Tix"
>> ("package ifneeded" script)
>> invoked from within
>> "package require Tix"
>> invoked from within
>> "if { [ string first tclsh [ file tail [ info nameofexecutable ] ] ] !
>> = 0 } {
>> package require Tix
>> tix configure -scheme TixGray
>> option add ..."
>> (file "/users/cliff/fsl/tcl/fslstart.tcl" line 3)
>> invoked from within
>> "source [ file dirname [ info script ] ]/fslstart.tcl"
>> (file "/users/cliff/fsl/tcl/fsl.tcl" line 71)
>> invoked from within
>> "source ${FSLDIR}/tcl/${origname}.tcl"
>> (file "/users/cliff/fsl/bin/fsl" line 19)
>> [Clifford-Smiths-Computer:~] Cliff%
>>
>> ------------------
>> Clifford Smith, PhD
>> Assistant Professor of Behavioral Sciences
>> Rush University Medical Center
>> 312.942.2893
>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
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