just download and install the whole MNI package. Much easier than trying to install various pieces....

On Thu, 9 Jun 2005, Arvind Gururajan wrote:

Hello,

I am very new to Freesurfer. Could anybody please tell me which specific
MNI tool, I need to install?



I tried the following command.

./recon-all -smooth1 ZM
########################################
program versions used
$Id: recon-all-nmr,v 1.37 2004/01/06 22:21:48 tosa Exp $
$Id: mri_motion_correct2,v 1.7 2004/01/16 20:25:10 tosa Exp $
mri_convert --version
$
strings: rawtominc:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
strings: minctracc:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
strings: mincresample:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
strings: mincaverage:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
$Id: talairach2,v 1.5 2003/08/28 21:45:48 tosa Exp $
mri_convert --version
$
strings: mritotal:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
strings: nu_correct:: No such file or directory
strings: Command: No such file or directory
strings: not: No such file or directory
strings: found.: No such file or directory
$
$
$
$
$
$
$
$
$
$
$
$
$
$
$
$
#######################################
ERROR: Flag ZM unrecognized.
-smooth1 ZM


The folder ZM has only one orig file in the surf directory. There are no
raw data(.COR files). Please let me know your feedback.

Sincerely,

Arvind Gururajan

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