Hi Bruce, I've checked the system and found the MNI package is installed. (Someone installed it a while ago) When I did "locate nu_correct" for the error message, there was nothing on "nu_correct". There was a huge directory that includes MNI stuff. So, it is installed but there is NO such thing as "nu_correct".
What would you recommend me to do next? (1) Install it again, or (2) I don't have to do it, since the error message is only due to mistakes in one of the environment variables for MNI package. If so, is there any source for correcting environment variables for the MNI package? Nam. >>> Bruce Fischl <[EMAIL PROTECTED]> 10/19/04 3:16 PM >>> it looks like you don't have the MNI software installed (nu_correct comes from there) Bruce On Tue, 19 Oct 2004, Joongnam Yang wrote: > Hi, > > I used the following command > > recon-all -stage1 -subjid blobby > > and I got the following error message > (Please let me know what is wrong with Freesurfer). > > -------------- copy of the exact error messages ------------------- > ######################################## > program versions used > $Id: recon-all-nmr,v 1.37 2004/01/06 22:21:48 tosa Exp $ > $Id: mri_motion_correct2,v 1.7 2004/01/16 20:25:10 tosa Exp $ > mri_convert --version > $ > $Header: /software/source//minc/cvsroot/minc/progs/rawtominc/rawtominc.c,v > 6.8 2002/08/05 00:53:50 neelin Exp $ > minctracc.c > $Header: > /software/source/registration/mni_autoreg/minctracc/Main/minctracc.c,v > 96.3 2000/03/15 08:42:41 stever Exp $ > $Header: > /software/source//minc/cvsroot/minc/progs/mincresample/mincresample.c,v 6.11 > 2002/11/06 13:32:23 jason Exp $ > $Header: > /software/source//minc/cvsroot/minc/progs/mincaverage/mincaverage.c,v 6.4 > 2001/04/24 13:38:42 neelin Exp $ > $Id: talairach2,v 1.5 2003/08/28 21:45:48 tosa Exp $ > mri_convert --version > $ > # $Id: mritotal.in,v 1.10 2000/06/14 12:55:01 louis Exp $ > strings: nu_correct:: No such file or directory > strings: Command: No such file or directory > strings: not: No such file or directory > strings: found.: No such file or directory > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > $ > ####################################### > INFO: SUBJECTS_DIR is /home/nam > ERROR: nu_correct does not exist > --------- end of the copy of the error messages -------------------------- > _______________________________________________ > Freesurfer mailing list > [EMAIL PROTECTED] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list [EMAIL PROTECTED] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
