On Tuesday, June 28, 2016, Afif Elghraoui <a...@debian.org> wrote: > Hello, > > على الإثنين 27 حزيران 2016 12:04، كتب Michael Crusoe: > > Python packages that need packaging: > > > > bx-python > [...] > > I had started some packaging work on bx-python as a dependency for > pbtranscript, but that seems not to be a dependency anymore, so I didn't > pursue it. In any case, bx-python development looks to me to have > stopped. I didn't find upstream very responsive either [1] (based on a > communication attempt and lack of activity on bitbucket). I started some > packaging, but it will need some hacking to work. I can push what I have > if anyone is interested in it.
bx-python development moved to Github, you should see more action there: https://github.com/bxlab/bx-python It should be straightforward to package. In case the documentation doesn't say so, numpy is a build dependency. > > > > > This should a complete list, Nate promises that there are no hidden sub > > dependencies. > > > > They also use a custom fork of pysam > > What's the plan for this? Integrate the patches upstream or packaging > the fork? They should be upstreamed, but I don't know when this will happen. --nate > > regards > Afif > > 1. > > https://bitbucket.org/james_taylor/bx-python/issues/59/tagged-releases-corresponding-to-those-on > > > -- > Afif Elghraoui | عفيف الغراوي > http://afif.ghraoui.name >
