Hi Andreas, ok, the plan sounds reasonable. Besides these issues, I consider to include the tbb lib in the source tarball to make it easy for those who download it for compilation. As far as I understood the tbb could be dropped by the patch for packaging based on tarball, right? Or would this complicate the packaging process or be against conventions?
Thank you a lot for the help! Best, Johannes On Jan 29, 2013, at 8:29 AM, Andreas Tille <ti...@debian.org> wrote: > Hi Johannes, > > thanks again for your very helpful clarification. After reading this I > think it might be the best idea if we try to package flexbar as it is > (including seqan copy) for the experimental branch in Debian which helps > Toni for the moment and once there might be some new seqan library > release we will build flexbar using this new release and move it to main > Debian. I guess for the moment this helps those who need flexbar now > and is technically OK. > > Toni, do you consider it reasonable if we do this together at the Debian > Med Sprint in Kiel? > > Johannes, thanks again for sharing your insight and also for providing > flexbar as free software > > Andreas. > > On Mon, Jan 28, 2013 at 04:09:08PM +0100, Johannes Röhr wrote: >> Hi Andreas, >> >> it is completely clear to me that one should use as many packaged libraries >> as possible. I'm simply not sure if it works with the older SeqAn package >> apart from modifications. I would have to test this first, and for reasons >> of consistency I would then go back to this release also on sourceforge. >> Since I know that a lot changes were introduced in the recent year, >> especially in the align module and the argument parser, this could cause >> problems and I also prefer to rely on the recent implementations. >> >> Therefore, I propose to wait for the next SeqAn package release. I will then >> use it also for the Flexbar version on sourceforge and will try to come >> along without modifications. Since I applied only very slight modifications, >> I am optimistic that it works out and I will discuss it with SeqAn >> developers. I definitely prefer to use an official and unmodified release, >> and see it as an aim for coming versions. Besides from cleaner sources and >> packaging, it would then also become obsolete to adjust new SeqAn libs to >> modifications for inclusion in Flexbar. However, I am not sure how fast a >> new packaged release will be provided. >> >> Best regards >> Johannes > > -- > http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/ba2990d1-7d53-4664-b7d8-4d362fd16...@users.sourceforge.net
