It looks like the error you get when using cxx=11 is from ginkgo so if you don't need ginkgo, you could try something like
spack install dea...@9.2.0 ~ginkgo ^bo...@1.76.0 cxxstd=11 %g...@12.2.0 Bruno Le ven. 23 juin 2023 à 14:47, Andrew Li <a...@andrew.cmu.edu> a écrit : > Unfortunately dealii@9.2.0 seems to be incompatible with boost versions > greater than v1.77 according to spack > > ==> Error: concretization failed for the following reasons: > > 1. Cannot select a single "version" for package "boost" > 2. Cannot satisfy 'boost@:1.77.0' > 3. Cannot satisfy 'boost@:1.76' > 4. Cannot satisfy 'boost@1.82' > 5. Cannot satisfy 'boost@1.59.0:1.63,1.65.1,1.67.0:1.79' > > Best, > Andrew > On Friday, June 23, 2023 at 2:43:08 PM UTC-4 bruno.t...@gmail.com wrote: > >> The error is from here >> >> In file included from ./boost/math/tools/mp.hpp:341, >> from ./boost/math/policies/policy.hpp:11, >> from ./boost/math/special_functions/math_fwd.hpp:31, >> from ./boost/math/special_functions/airy.hpp:11, >> from ./boost/math/special_functions.hpp:15, >> from libs/math/build/../src/tr1/pch.hpp:9: >> /home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-11.2.0/gcc-12.2.0-lwc56owtziygs5xlu3yqpulfp6fvaulb/lib/gcc/x86_64-pc-linux-gnu/12.2.0/../../../../include/c++/12.2.0/utility:94:14: >> error: '__and_' was not declared in this scope; did you mean 'std::__and_'? >> 94 | noexcept(__and_<is_nothrow_move_constructible<_Tp>, >> | ^~~~~~ >> | std::__and_ >> >> I don't see ./boost/math/tools/mp.hpp in version 1.82 of boost. Does that >> one work? >> >> Bruno >> >> Le ven. 23 juin 2023 à 14:23, Andrew Li <a...@andrew.cmu.edu> a écrit : >> >>> Hi Bruno, >>> >>> I've attached the output file spack generated with the original error >>> message. I changed the c++ standard originally because I saw a similar >>> problem on this link (https://github.com/spack/spack/issues/15869). >>> Currently I'm trying various boost versions with dea...@9.2.0, as well >>> as versions down to dea...@9.0.0. So far nothing has worked yet. >>> >>> Best, >>> Andrew >>> >>> On Friday, June 23, 2023 at 1:01:17 PM UTC-4 Andrew Li wrote: >>> >>>> I assume the error has changed because spack automatically found the >>>> new boost package which has been installed using cxxstd=11. In fact, >>>> specifying the boost installation to cxxstd=17 again reproduces the >>>> original error message. I'm rerunning that installation to get the >>>> build-log file now >>>> >>>> >>>> On Friday, June 23, 2023 at 12:39:24 PM UTC-4 Andrew Li wrote: >>>> >>>>> Hi Bruno, >>>>> >>>>> Thanks for your quick response! The error message I get when i run >>>>> [al5@coe ~]$ srun --mem-per-cpu=16G spack install dea...@9.2.0 >>>>> %g...@12.2.0 >>>>> >>>>> is >>>>> >>>>> ==> Installing dealii-9.2.0-27ysq7kvk7cdu7t2a6jjqmls4qd5fsbc >>>>> ==> No binary for dealii-9.2.0-27ysq7kvk7cdu7t2a6jjqmls4qd5fsbc found: >>>>> installing from source >>>>> >>>>> 1 out of 1 hunk FAILED -- saving rejects to file >>>>> cmake/modules/FindGINKGO.cmake.rej >>>>> 1 out of 1 hunk FAILED -- saving rejects to file >>>>> cmake/modules/FindGINKGO.cmake.rej >>>>> ==> Using cached archive: >>>>> /home/al5/.spack/var/spack/cache/_source-cache/archive/d0/d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a.tar.gz >>>>> ==> Using cached archive: >>>>> /home/al5/.spack/var/spack/cache/_source-cache/archive/c9/c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e >>>>> >>>>> ==> Patch >>>>> https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1 >>>>> failed. >>>>> ==> Error: ProcessError: Command exited with status 1: >>>>> '/usr/bin/patch' '-s' '-p' '1' '-i' >>>>> '/tmp/al5/spack-stage/spack-stage-fd9czbgb/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1' >>>>> '-d' '.' >>>>> srun: error: e001: task 0: Exited with exit code 1 >>>>> >>>>> I have also tried specifying boost to bo...@1.72 and bo...@1.68. the >>>>> error is the same as the one above. >>>>> >>>>> Best, >>>>> Andrew >>>>> >>>>> On Friday, June 23, 2023 at 11:53:58 AM UTC-4 bruno.t...@gmail.com >>>>> wrote: >>>>> >>>>>> Andrew, >>>>>> >>>>>> What's the error message that you get when using `spack install >>>>>> dea...@9.2.0 %g...@12.2.0` ? spack writes the exact error in an >>>>>> output file. I don't think changing the C++ standard is the right fix, >>>>>> instead I would change the version of boost. >>>>>> >>>>>> Best, >>>>>> >>>>>> Bruno >>>>>> >>>>>> On Friday, June 23, 2023 at 10:15:08 AM UTC-4 a...@andrew.cmu.edu >>>>>> wrote: >>>>>> >>>>>>> Dear all, >>>>>>> >>>>>>> I hope this is the right place to post this question. I am trying to >>>>>>> install an older version of dealii on a centos7 cluster using spack, >>>>>>> and am >>>>>>> running into issues. I have no problem installing dea...@9.4.2, but >>>>>>> am unable to install dea...@9.2.0. >>>>>>> >>>>>>> If I run without specifying boost cxxstd >>>>>>> >>>>>>> spack install dea...@9.2.0 %g...@12.2.0 >>>>>>> >>>>>>> I get an error >>>>>>> >>>>>>> ==> boost: Executing phase: 'install' >>>>>>> ==> Error: ProcessError: Command exited with status 1: >>>>>>> './b2' 'install' 'threading=multi' '-j' '4' >>>>>>> '--user-config=/tmp/al5/spack-stage/spack-stage-boost-1.76.0-2ykrczt6n7igaz645shnq2pscuosk3al/spack-src/user-config.jam' >>>>>>> 'variant=release' '--disable-icu' '-s' >>>>>>> 'BZIP2_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/include' >>>>>>> '-s' >>>>>>> 'BZIP2_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/lib' >>>>>>> '-s' >>>>>>> 'ZLIB_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/include' >>>>>>> '-s' >>>>>>> 'ZLIB_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/lib' >>>>>>> '-s' >>>>>>> 'LZMA_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/include' >>>>>>> '-s' >>>>>>> 'LZMA_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/lib' >>>>>>> '-s' >>>>>>> 'ZSTD_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/include' >>>>>>> '-s' >>>>>>> 'ZSTD_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/lib' >>>>>>> 'link=static,shared' '--layout=system' 'toolset=gcc' 'cxxstd=17' >>>>>>> 'visibility=hidden' >>>>>>> >>>>>>> If I run with either setting boost cxxstd=11 or 98 >>>>>>> >>>>>>> spack install dea...@9.2.0 ^bo...@1.76.0 cxxstd=11 %g...@12.2.0, >>>>>>> >>>>>>> I get the error >>>>>>> >>>>>>> 1 out of 1 hunk FAILED -- saving rejects to file >>>>>>> cmake/modules/FindGINKGO.cmake.rej >>>>>>> 1 out of 1 hunk FAILED -- saving rejects to file >>>>>>> cmake/modules/FindGINKGO.cmake.rej >>>>>>> ==> Using cached archive: >>>>>>> /home/al5/.spack/var/spack/cache/_source-cache/archive/d0/d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a.tar.gz >>>>>>> ==> Using cached archive: >>>>>>> /home/al5/.spack/var/spack/cache/_source-cache/archive/90/90ae9ddefe77fffd297bba6b070ab68d07306d4ef525ee994e8c49cef68f76f3 >>>>>>> ==> Using cached archive: >>>>>>> /home/al5/.spack/var/spack/cache/_source-cache/archive/c9/c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e >>>>>>> ==> Applied patch >>>>>>> https://github.com/dealii/dealii/commit/3b815e21c4bfd82c792ba80e4d90314c8bb9edc9.patch?full_index=1 >>>>>>> ==> Patch >>>>>>> https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1 >>>>>>> failed. >>>>>>> ==> Error: ProcessError: Command exited with status 1: >>>>>>> '/usr/bin/patch' '-s' '-p' '1' '-i' >>>>>>> '/tmp/al5/spack-stage/spack-stage-s5pzaunz/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1' >>>>>>> '-d' '.' >>>>>>> >>>>>>> Can anyone advise me on what to do? >>>>>>> >>>>>>> Thank you, >>>>>>> Andrew >>>>>>> >>>>>> -- >>> The deal.II project is located at http://www.dealii.org/ >>> For mailing list/forum options, see >>> https://groups.google.com/d/forum/dealii?hl=en >>> --- >>> You received this message because you are subscribed to a topic in the >>> Google Groups "deal.II User Group" group. >>> To unsubscribe from this topic, visit >>> https://groups.google.com/d/topic/dealii/m1B0WyihX1E/unsubscribe. >>> To unsubscribe from this group and all its topics, send an email to >>> dealii+un...@googlegroups.com. >>> To view this discussion on the web visit >>> https://groups.google.com/d/msgid/dealii/81f5863c-e723-49c8-a044-4c7b0e85cc18n%40googlegroups.com >>> <https://groups.google.com/d/msgid/dealii/81f5863c-e723-49c8-a044-4c7b0e85cc18n%40googlegroups.com?utm_medium=email&utm_source=footer> >>> . >>> >> -- > The deal.II project is located at http://www.dealii.org/ > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > --- > You received this message because you are subscribed to a topic in the > Google Groups "deal.II User Group" group. > To unsubscribe from this topic, visit > https://groups.google.com/d/topic/dealii/m1B0WyihX1E/unsubscribe. > To unsubscribe from this group and all its topics, send an email to > dealii+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/dealii/03fa41be-b0bc-49b6-866a-a17d4b5281ebn%40googlegroups.com > <https://groups.google.com/d/msgid/dealii/03fa41be-b0bc-49b6-866a-a17d4b5281ebn%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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