Dear all,
I hope this is the right place to post this question. I am trying to
install an older version of dealii on a centos7 cluster using spack, and am
running into issues. I have no problem installing dealii@9.4.2, but am
unable to install dealii@9.2.0.
If I run without specifying boost cxxstd
spack install dealii@9.2.0 %g...@12.2.0
I get an error
==> boost: Executing phase: 'install'
==> Error: ProcessError: Command exited with status 1:
'./b2' 'install' 'threading=multi' '-j' '4'
'--user-config=/tmp/al5/spack-stage/spack-stage-boost-1.76.0-2ykrczt6n7igaz645shnq2pscuosk3al/spack-src/user-config.jam'
'variant=release' '--disable-icu' '-s'
'BZIP2_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/include'
'-s'
'BZIP2_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/lib'
'-s'
'ZLIB_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/include'
'-s'
'ZLIB_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/lib'
'-s'
'LZMA_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/include'
'-s'
'LZMA_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/lib'
'-s'
'ZSTD_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/include'
'-s'
'ZSTD_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/lib'
'link=static,shared' '--layout=system' 'toolset=gcc' 'cxxstd=17'
'visibility=hidden'
If I run with either setting boost cxxstd=11 or 98
spack install dea...@9.2.0 ^bo...@1.76.0 cxxstd=11 %g...@12.2.0,
I get the error
1 out of 1 hunk FAILED -- saving rejects to file
cmake/modules/FindGINKGO.cmake.rej
1 out of 1 hunk FAILED -- saving rejects to file
cmake/modules/FindGINKGO.cmake.rej
==> Using cached archive:
/home/al5/.spack/var/spack/cache/_source-cache/archive/d0/d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a.tar.gz
==> Using cached archive:
/home/al5/.spack/var/spack/cache/_source-cache/archive/90/90ae9ddefe77fffd297bba6b070ab68d07306d4ef525ee994e8c49cef68f76f3
==> Using cached archive:
/home/al5/.spack/var/spack/cache/_source-cache/archive/c9/c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e
==> Applied patch
https://github.com/dealii/dealii/commit/3b815e21c4bfd82c792ba80e4d90314c8bb9edc9.patch?full_index=1
==> Patch
https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1
failed.
==> Error: ProcessError: Command exited with status 1:
'/usr/bin/patch' '-s' '-p' '1' '-i'
'/tmp/al5/spack-stage/spack-stage-s5pzaunz/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1'
'-d' '.'
Can anyone advise me on what to do?
Thank you,
Andrew
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