Hi Bruno, Thanks for your quick response! The error message I get when i run [al5@coe ~]$ srun --mem-per-cpu=16G spack install dealii@9.2.0 %gcc@12.2.0
is ==> Installing dealii-9.2.0-27ysq7kvk7cdu7t2a6jjqmls4qd5fsbc ==> No binary for dealii-9.2.0-27ysq7kvk7cdu7t2a6jjqmls4qd5fsbc found: installing from source 1 out of 1 hunk FAILED -- saving rejects to file cmake/modules/FindGINKGO.cmake.rej 1 out of 1 hunk FAILED -- saving rejects to file cmake/modules/FindGINKGO.cmake.rej ==> Using cached archive: /home/al5/.spack/var/spack/cache/_source-cache/archive/d0/d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a.tar.gz ==> Using cached archive: /home/al5/.spack/var/spack/cache/_source-cache/archive/c9/c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e ==> Patch https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1 failed. ==> Error: ProcessError: Command exited with status 1: '/usr/bin/patch' '-s' '-p' '1' '-i' '/tmp/al5/spack-stage/spack-stage-fd9czbgb/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1' '-d' '.' srun: error: e001: task 0: Exited with exit code 1 I have also tried specifying boost to boost@1.72 and boost@1.68. the error is the same as the one above. Best, Andrew On Friday, June 23, 2023 at 11:53:58 AM UTC-4 bruno.t...@gmail.com wrote: > Andrew, > > What's the error message that you get when using `spack install > dea...@9.2.0 %g...@12.2.0` ? spack writes the exact error in an output > file. I don't think changing the C++ standard is the right fix, instead I > would change the version of boost. > > Best, > > Bruno > > On Friday, June 23, 2023 at 10:15:08 AM UTC-4 a...@andrew.cmu.edu wrote: > >> Dear all, >> >> I hope this is the right place to post this question. I am trying to >> install an older version of dealii on a centos7 cluster using spack, and am >> running into issues. I have no problem installing dea...@9.4.2, but am >> unable to install dea...@9.2.0. >> >> If I run without specifying boost cxxstd >> >> spack install dea...@9.2.0 %g...@12.2.0 >> >> I get an error >> >> ==> boost: Executing phase: 'install' >> ==> Error: ProcessError: Command exited with status 1: >> './b2' 'install' 'threading=multi' '-j' '4' >> '--user-config=/tmp/al5/spack-stage/spack-stage-boost-1.76.0-2ykrczt6n7igaz645shnq2pscuosk3al/spack-src/user-config.jam' >> >> 'variant=release' '--disable-icu' '-s' >> 'BZIP2_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/include' >> >> '-s' >> 'BZIP2_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/bzip2-1.0.8-lhu2fvk3ssx5w66tth4tp6kjorlgfj2u/lib' >> >> '-s' >> 'ZLIB_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/include' >> >> '-s' >> 'ZLIB_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zlib-1.2.13-qemlwst2qu3yyrmrlgdnomlmzbjsgs34/lib' >> >> '-s' >> 'LZMA_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/include' >> >> '-s' >> 'LZMA_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/xz-5.4.1-lux543af2a73htjercpienfpkmx64zez/lib' >> >> '-s' >> 'ZSTD_INCLUDE=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/include' >> >> '-s' >> 'ZSTD_LIBPATH=/home/al5/.spack/opt/spack/linux-centos7-broadwell/gcc-12.2.0/zstd-1.5.5-gfcgznqbaijyvpybcdyqkpjhzc3zylg2/lib' >> >> 'link=static,shared' '--layout=system' 'toolset=gcc' 'cxxstd=17' >> 'visibility=hidden' >> >> If I run with either setting boost cxxstd=11 or 98 >> >> spack install dea...@9.2.0 ^bo...@1.76.0 cxxstd=11 %g...@12.2.0, >> >> I get the error >> >> 1 out of 1 hunk FAILED -- saving rejects to file >> cmake/modules/FindGINKGO.cmake.rej >> 1 out of 1 hunk FAILED -- saving rejects to file >> cmake/modules/FindGINKGO.cmake.rej >> ==> Using cached archive: >> /home/al5/.spack/var/spack/cache/_source-cache/archive/d0/d05a82fb40f1f1e24407451814b5a6004e39366a44c81208b1ae9d65f3efa43a.tar.gz >> ==> Using cached archive: >> /home/al5/.spack/var/spack/cache/_source-cache/archive/90/90ae9ddefe77fffd297bba6b070ab68d07306d4ef525ee994e8c49cef68f76f3 >> ==> Using cached archive: >> /home/al5/.spack/var/spack/cache/_source-cache/archive/c9/c9884ebb0fe379c539012a225d8bcdcfe288edec8dc9d319fbfd64d8fbafba8e >> ==> Applied patch >> https://github.com/dealii/dealii/commit/3b815e21c4bfd82c792ba80e4d90314c8bb9edc9.patch?full_index=1 >> ==> Patch >> https://github.com/dealii/dealii/commit/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1 >> >> failed. >> ==> Error: ProcessError: Command exited with status 1: >> '/usr/bin/patch' '-s' '-p' '1' '-i' >> '/tmp/al5/spack-stage/spack-stage-s5pzaunz/df6c5de8d6785fce701c10575982858f3aeb4cbd.patch?full_index=1' >> >> '-d' '.' >> >> Can anyone advise me on what to do? >> >> Thank you, >> Andrew >> > -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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