Re: [ccp4bb] cif file uploading error

[Ezra Peisach]

Are you talking about the wwPDB validation server - or validation report 
in Phenix.

Nick mentioned server, Manjula said in Phenix.
There are different email addresses for support from each 
service/software and you might try there.


On 1/5/25 10:52 AM, Manjula Ramu wrote:
Hi Nicholas,
yes, I renamed the file I tried too.
I still get the error.

Thanks,

Manju



<https://www.nimhans.kar.nic.in/>


On Sun, Jan 5, 2025 at 10:49 AM Nicholas Clark <ndcla...@buffalo.edu> 
wrote:

    Hi Maju,

    This might be a simple solution, but have you tried removing the
    ".pdb" from the ".pdb.cif" file name (i.e. renaming the file)?
    Maybe it's confusing the file reading package on the validation
    server?

    Best,

    Nick

    On Sun, Jan 5, 2025 at 10:02 AM Manjula Ramu
    <manjula....@gmail.com> wrote:

        Dear community,

        I encountered an issue while uploading data (attached) to
        generate the validation report in Phenix. The error message
        states:

        "The PDB server reports a failure with your data. Please check
        that your input file follows the CIF specifications."

        I faced the same error with previously uploaded files as well.
        Since I suspect there may not be any actual errors in the CIF
        file, I would greatly appreciate your help in identifying and
        resolving this issue.

        Thanks and Regards,

        Manju




        
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    University at Buffalo
    Department of Structural Biology
    Jacob's School of Medicine & Biomedical Sciences
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