bioc-devel

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2023/04/15 [Bioc-devel] taking over package, fixing build error Evan Biederstedt
2023/04/14 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Hervé Pagès
2023/04/13 Re: [Bioc-devel] Commit access for package projectR Genevieve Stein-O'Brien
2023/04/13 [Bioc-devel] TIMEOUT on merida1 on devel Nils Eling
2023/04/12 [Bioc-devel] git access Kern, Lori
2023/04/12 Re: [Bioc-devel] extraChIPs builds failing on palamino3 and merida1 Stevie Pederson
2023/04/12 Re: [Bioc-devel] Problem with the submission of the related packages Arek Gładki
2023/04/12 Re: [Bioc-devel] Need help with the maintenance of package SCBN Kern, Lori
2023/04/12 Re: [Bioc-devel] Problem with the submission of the related packages Kern, Lori
2023/04/12 [Bioc-devel] Need help with the maintenance of package SCBN 朱家嫡 via Bioc-devel
2023/04/12 [Bioc-devel] extraChIPs builds failing on palamino3 and merida1 Stevie Pederson
2023/04/11 [Bioc-devel] Problem with the submission of the related packages Arek Gładki
2023/04/11 Re: [Bioc-devel] Error building package ELENI ADAM
2023/04/11 Re: [Bioc-devel] missing packages on nebbiolo1 Henrik Bengtsson
2023/04/11 [Bioc-devel] missing packages on nebbiolo1 Kevin Horan
2023/04/11 Re: [Bioc-devel] Problem in merida1 Jennifer Wokaty
2023/04/11 [Bioc-devel] Problem in merida1 José Luiz Rybarczyk Filho
2023/04/10 [Bioc-devel] Release_3_16 branch is now frozen. Kern, Lori
2023/04/10 [Bioc-devel] List of Deprecated Packages for Bioc3.17 Kern, Lori
2023/04/10 [Bioc-devel] RELEASE_3_16 branch freeze at 12 pm EDT today. Kern, Lori
2023/04/10 Re: [Bioc-devel] orthogene: killed while reading tree Brian Schilder
2023/04/10 Re: [Bioc-devel] orthogene: killed while reading tree Kern, Lori
2023/04/10 Re: [Bioc-devel] Commit access for package projectR Kern, Lori
2023/04/10 [Bioc-devel] Commit access for package projectR Gaurav Sharma via Bioc-devel
2023/04/09 Re: [Bioc-devel] Will package version 3.99.0 bump to 4.0.0? Henrik Bengtsson
2023/04/09 Re: [Bioc-devel] Will package version 3.99.0 bump to 4.0.0? Kern, Lori
2023/04/08 [Bioc-devel] Will package version 3.99.0 bump to 4.0.0? Gordon Smyth via Bioc-devel
2023/04/07 Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Justin Silverman
2023/04/07 Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Robert M. Flight
2023/04/07 Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Oleksii Nikolaienko
2023/04/07 [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Justin Silverman
2023/04/06 Re: [Bioc-devel] Error building package Henrik Bengtsson
2023/04/06 [Bioc-devel] Error building package ELENI ADAM
2023/04/05 [Bioc-devel] orthogene: killed while reading tree Brian Schilder
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Kern, Lori
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Kern, Lori
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
2023/04/05 Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Sarvesh Nikumbh
2023/04/04 Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Rainer Johannes
2023/04/04 Re: [Bioc-devel] EXTERNAL: Re: Bad description file matine rb
2023/04/04 Re: [Bioc-devel] EXTERNAL: Re: Bad description file Ramos Perez, Marcel
2023/04/04 Re: [Bioc-devel] Bad description file Martin Morgan
2023/04/04 Re: [Bioc-devel] EXTERNAL: Bad description file Ramos Perez, Marcel
2023/04/04 [Bioc-devel] Bad description file matine rb
2023/04/04 [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
2023/04/04 Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Henrik Bengtsson
2023/04/04 [Bioc-devel] BIoconductor 3.16 Code Freeze Kern, Lori
2023/04/04 Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Oleksii Nikolaienko
2023/04/04 [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Rainer Johannes
2023/04/03 Re: [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17 Kern, Lori
2023/04/03 [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17 You Zhou
2023/03/30 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Deepayan Sarkar
2023/03/30 Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
2023/03/29 Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Martin Morgan
2023/03/29 Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
2023/03/29 Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Martin Morgan
2023/03/29 [Bioc-devel] rowSums, colSums, rowMeans, colMeans generics moved from BiocGenerics to MatrixGenerics Hervé Pagès
2023/03/29 [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
2023/03/29 [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori
2023/03/28 Re: [Bioc-devel] I cannot log into my Bioconductor Git Credentials Kern, Lori
2023/03/28 [Bioc-devel] I cannot log into my Bioconductor Git Credentials Sara Stankiewicz
2023/03/27 Re: [Bioc-devel] Push changes to release branch matine rb
2023/03/27 Re: [Bioc-devel] Push changes to release branch Jennifer Wokaty
2023/03/27 [Bioc-devel] _R_CHECK_SUGGESTS_ONLY=true Jennifer Wokaty
2023/03/27 [Bioc-devel] Push changes to release branch matine rb
2023/03/27 Re: [Bioc-devel] Problem updating package Kern, Lori
2023/03/27 [Bioc-devel] Problem updating package Sonia Tarazona
2023/03/27 Re: [Bioc-devel] "Graphics API version mismatch": Devel package check on macOS failing Jennifer Wokaty
2023/03/27 Re: [Bioc-devel] Deprecation of package chromswitch Kern, Lori
2023/03/27 Re: [Bioc-devel] Please deprecate NxtIRFcore Kern, Lori
2023/03/27 [Bioc-devel] New Package Submission Deadline this Friday for Bioconductor 3.17 Kern, Lori
2023/03/27 [Bioc-devel] "Graphics API version mismatch": Devel package check on macOS failing Sarvesh Nikumbh
2023/03/26 [Bioc-devel] Please deprecate NxtIRFcore Alex Wong via Bioc-devel
2023/03/26 Re: [Bioc-devel] download stats not accessible Luo Weijun via Bioc-devel
2023/03/24 Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Hervé Pagès
2023/03/24 [Bioc-devel] Deprecation of package chromswitch Selin Jessa
2023/03/24 Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Pooja Gangras
2023/03/22 Re: [Bioc-devel] download stats not accessible Hervé Pagès
2023/03/21 Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Hervé Pagès
2023/03/21 Re: [Bioc-devel] Manifest and annotation packages for EPIC methylation array v2.0 Zuguang Gu
2023/03/21 Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Pooja Gangras
2023/03/21 Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Hervé Pagès
2023/03/21 Re: [Bioc-devel] Single Package Builder package dependency issue Kern, Lori
2023/03/21 Re: [Bioc-devel] download stats not accessible Luo Weijun via Bioc-devel
2023/03/21 Re: [Bioc-devel] Reopen cfTools issue #2608 RAN HU
2023/03/21 [Bioc-devel] surfaltr build on Bioc 3.17 error advice Pooja Gangras
2023/03/21 Re: [Bioc-devel] Reopen cfTools issue #2608 Kern, Lori
2023/03/21 Re: [Bioc-devel] Reopen cfTools issue #2608 RAN HU
2023/03/21 [Bioc-devel] Bioconductor 3.17 db0s, OrgDbs and TxDbs now available Interdonato, Kayla
2023/03/21 Re: [Bioc-devel] Manifest and annotation packages for EPIC methylation array v2.0 Kern, Lori
2023/03/21 Re: [Bioc-devel] Reopen cfTools issue #2608 Kern, Lori
2023/03/20 [Bioc-devel] Reopen cfTools issue #2608 RAN HU
2023/03/20 Re: [Bioc-devel] updating pathwayPCA: "permission denied (publickey)" Gabriel Odom
2023/03/20 [Bioc-devel] Single Package Builder package dependency issue Kern, Lori
2023/03/20 Re: [Bioc-devel] download stats not accessible Sarvesh Nikumbh
2023/03/20 Re: [Bioc-devel] download stats not accessible Hervé Pagès
2023/03/20 Re: [Bioc-devel] Packages failing on macOS build system - recent updates to the build system? Jennifer Wokaty
2023/03/20 [Bioc-devel] Packages failing on macOS build system - recent updates to the build system? Rainer Johannes
2023/03/19 Re: [Bioc-devel] download stats not accessible Henrik Bengtsson
2023/03/19 [Bioc-devel] download stats not accessible Luo Weijun via Bioc-devel
2023/03/18 [Bioc-devel] Manifest and annotation packages for EPIC methylation array v2.0 Zuguang Gu
2023/03/16 Re: [Bioc-devel] mzR crashing R session Neumann, Steffen
2023/03/15 Re: [Bioc-devel] mzR crashing R session Laurent Gatto
2023/03/15 [Bioc-devel] mzR crashing R session TYLER H WINTERMUTE via Bioc-devel
2023/03/13 [Bioc-devel] Bioconductor 3.17 Release Schedule Kern, Lori
2023/03/08 Re: [Bioc-devel] Bioconductor will rename the default branch on `git.bioconductor.org` to `devel` Kern, Lori
2023/03/07 Re: [Bioc-devel] WARNING: R CMD check exceeded 10 min requirement Kern, Lori
2023/03/07 [Bioc-devel] WARNING: R CMD check exceeded 10 min requirement Y-h. Taguchi
2023/03/07 Re: [Bioc-devel] Fwd: TDbasedUFE problems reported in the Multiple platform build/check report for BioC 3.17 Jennifer Wokaty
2023/03/07 [Bioc-devel] Fwd: TDbasedUFE problems reported in the Multiple platform build/check report for BioC 3.17 Y-h. Taguchi
2023/03/06 Re: [Bioc-devel] seqArchRplus build error on Linux Jennifer Wokaty
2023/03/06 Re: [Bioc-devel] BiocViews for long read technology Kern, Lori
2023/03/06 [Bioc-devel] BiocViews for long read technology Michael Love
2023/03/06 [Bioc-devel] seqArchRplus build error on Linux Sarvesh Nikumbh
2023/03/02 Re: [Bioc-devel] Openssl is not available in netConnectHttps for importing remote BigWig files Leonardo Collado Torres
2023/03/02 Re: [Bioc-devel] Openssl is not available in netConnectHttps for importing remote BigWig files Hervé Pagès
2023/03/02 Re: [Bioc-devel] libsbml and libxml2 on palomino3 BBS Jennifer Wokaty
2023/03/02 Re: [Bioc-devel] Openssl is not available in netConnectHttps for importing remote BigWig files Jennifer Wokaty
2023/03/02 [Bioc-devel] Bioconductor will rename the default branch on `git.bioconductor.org` to `devel` Maria . Doyle
2023/03/01 [Bioc-devel] News: EuroBioC2023 abstract submission is open! Maria . Doyle
2023/02/27 [Bioc-devel] libsbml and libxml2 on palomino3 BBS Ahmed Mohamed
2023/02/27 Re: [Bioc-devel] Build error - Latex environment in vignettes Jennifer Wokaty
2023/02/26 [Bioc-devel] Build error - Latex environment in vignettes Sergio Picart Armada
2023/02/24 Re: [Bioc-devel] Bioconductor 3.17 requires R 4.3? Kern, Lori
2023/02/24 [Bioc-devel] News: Bioconductor call for events! Maria . Doyle
2023/02/24 Re: [Bioc-devel] Bioconductor 3.17 requires R 4.3? Y-h. Taguchi
2023/02/24 Re: [Bioc-devel] Bioconductor 3.17 requires R 4.3? Lluís Revilla
2023/02/24 [Bioc-devel] Bioconductor 3.17 requires R 4.3? Y-h. Taguchi
2023/02/23 [Bioc-devel] Openssl is not available in netConnectHttps for importing remote BigWig files Leonardo Collado Torres
2023/02/23 Re: [Bioc-devel] Installation of XCMS on R Vincent Carey
2023/02/23 Re: [Bioc-devel] Issue with setting Maintainer in new package submission Andrew Wight
2023/02/23 Re: [Bioc-devel] Issue with setting Maintainer in new package submission Kern, Lori
2023/02/23 Re: [Bioc-devel] Installation of XCMS on R Kern, Lori
2023/02/23 [Bioc-devel] Installation of XCMS on R insaf ben
2023/02/23 [Bioc-devel] Trouble modifying read-only ChipDb SQLite database Amanda Hiser via Bioc-devel
2023/02/22 Re: [Bioc-devel] Issue with setting Maintainer in new package submission Mike Smith
2023/02/22 [Bioc-devel] Issue with setting Maintainer in new package submission Andrew Wight
2023/02/22 Re: [Bioc-devel] Java version on merida1? Jennifer Wokaty
2023/02/22 [Bioc-devel] Java version on merida1? Shraddha Pai
2023/02/22 Re: [Bioc-devel] [EXTERNAL] Re: Question on prospective Bioc package Flanigan, Greg (NIH/NCI) [C] via Bioc-devel
2023/02/22 Re: [Bioc-devel] Question on prospective Bioc package SUTIRTHA CHAKRABORTY via Bioc-devel
2023/02/22 Re: [Bioc-devel] Question on prospective Bioc package Wolfgang Huber
2023/02/21 Re: [Bioc-devel] Cannot push to BioC git repo Ulrich Bodenhofer
2023/02/21 Re: [Bioc-devel] Cannot push to BioC git repo Kern, Lori
2023/02/21 Re: [Bioc-devel] MOSim package: change of maintainer Kern, Lori
2023/02/21 Re: [Bioc-devel] MOSim package: change of maintainer Sonia Tarazona
2023/02/21 Re: [Bioc-devel] Cannot push to BioC git repo Kern, Lori
2023/02/21 Re: [Bioc-devel] Cannot push to BioC git repo Kern, Lori
2023/02/21 Re: [Bioc-devel] Cannot push to BioC git repo Daniel, Dimitrov
2023/02/20 Re: [Bioc-devel] Cannot push to BioC git repo Martin Grigorov
2023/02/20 [Bioc-devel] Cannot push to BioC git repo Ulrich Bodenhofer
2023/02/20 [Bioc-devel] Cannot push to BioC git repo Ulrich Bodenhofer
2023/02/17 [Bioc-devel] Question on prospective Bioc package Flanigan, Greg (NIH/NCI) [C] via Bioc-devel
2023/02/17 [Bioc-devel] data experiment, workflow, and book pushes to git.bioconductor.org Kern, Lori
2023/02/16 Re: [Bioc-devel] GRridge problems reported in the Multiple platform build/check report for BioC 3.17 Kern, Lori
2023/02/15 [Bioc-devel] FW: GRridge problems reported in the Multiple platform build/check report for BioC 3.17 Wiel, M.A. van de (Mark)
2023/02/10 Re: [Bioc-devel] name for new BioC package Wolfgang Huber
2023/02/09 Re: [Bioc-devel] updating pathwayPCA: "permission denied (publickey)" James W. MacDonald
2023/02/09 [Bioc-devel] updating pathwayPCA: "permission denied (publickey)" Gabriel Odom
2023/02/07 [Bioc-devel] News: BioC2023 abstract submission is now open! Maria . Doyle
2023/02/07 Re: [Bioc-devel] TiSA awaiting moderation - 1 month Kern, Lori
2023/02/07 [Bioc-devel] TiSA awaiting moderation - 1 month Yohan Lefol
2023/02/07 Re: [Bioc-devel] name for new BioC package Martin Morgan
2023/02/07 Re: [Bioc-devel] name for new BioC package Matteo Tiberti
2023/02/04 Re: [Bioc-devel] name for new BioC package Kevin Coombes
2023/02/03 Re: [Bioc-devel] name for new BioC package Hervé Pagès
2023/02/03 Re: [Bioc-devel] name for new BioC package Laurent Gatto
2023/02/03 [Bioc-devel] name for new BioC package Matteo Tiberti
2023/01/30 Re: [Bioc-devel] git: lost write access to some repos Kern, Lori
2023/01/30 Re: [Bioc-devel] git: lost write access to some repos Y-h. Taguchi
2023/01/30 Re: [Bioc-devel] git: lost write access to some repos Y-h. Taguchi
2023/01/30 Re: [Bioc-devel] git: lost write access to some repos Kern, Lori
2023/01/30 [Bioc-devel] git: lost write access to some repos Y-h. Taguchi
2023/01/29 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Hervé Pagès
2023/01/28 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Deepayan Sarkar
2023/01/27 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Hervé Pagès
2023/01/27 Re: [Bioc-devel] S4 Methods Documentation Convention Triggers Warnings Dario Strbenac via Bioc-devel
2023/01/26 Re: [Bioc-devel] Warnings in "checking compiled code" of R CMD check Hervé Pagès
2023/01/26 [Bioc-devel] Warnings in "checking compiled code" of R CMD check Oleksii Nikolaienko
2023/01/25 [Bioc-devel] News: Seeking members for BioC2023 organizing committee Maria . Doyle
2023/01/24 Re: [Bioc-devel] Package "rmspc" failing on Bioconductor devel Jennifer Wokaty
2023/01/24 Re: [Bioc-devel] DESeq2 package Vincent Carey
2023/01/24 Re: [Bioc-devel] DESeq2 package Bernat Gel Moreno
2023/01/24 Re: [Bioc-devel] DESeq2 package Kern, Lori
2023/01/24 Re: [Bioc-devel] DESeq2 package Kern, Lori
2023/01/24 [Bioc-devel] DESeq2 package Claudio A Bravo
2023/01/23 Re: [Bioc-devel] 5mb limit for packfiles in .git is too harsh Kevin R. Coombes
2023/01/23 Re: [Bioc-devel] 5mb limit for packfiles in .git is too harsh Kern, Lori
2023/01/23 [Bioc-devel] 5mb limit for packfiles in .git is too harsh Park, Adam Keebum
2023/01/22 [Bioc-devel] Package "rmspc" failing on Bioconductor devel Meriem Bahda
2023/01/20 Re: [Bioc-devel] BFG repo cleaner did not perfectly work Nathan Sheffield via Bioc-devel
2023/01/20 [Bioc-devel] News: Seeking Outreachy interns and project proposals Maria . Doyle
2023/01/18 Re: [Bioc-devel] Maftools not working on Mac therefore package not passing macOS checks Jennifer Wokaty
2023/01/17 [Bioc-devel] Maftools not working on Mac therefore package not passing macOS checks Graciela Uria Regojo
2023/01/17 [Bioc-devel] BFG repo cleaner did not perfectly work Park, Adam Keebum
2023/01/17 [Bioc-devel] pack files not deleted from .git history Park, Adam Keebum
2023/01/14 Re: [Bioc-devel] Proposing patch to Bioconductor package Duncan Murdoch
2023/01/14 Re: [Bioc-devel] Proposing patch to Bioconductor package Duncan Murdoch