I'm not sure I have the ability to implement a different module management system, I am using a university cluster. We have a module system, and I am beginning to suspect that maybe it wasn't updated during the upgrade. I have module list ..other modules....openmpi/1.4.4 Perhaps this is still trying to go to the old source location? How would I check? Is there an easy way around it if it is wrong? Thanks again!
On Fri, May 16, 2014 at 5:07 PM, Maxime Boissonneault < maxime.boissonnea...@calculquebec.ca> wrote: > Instead of using the outdated and not maintained Module environment, why > not use Lmod : https://www.tacc.utexas.edu/tacc-projects/lmod > > It is a drop-in replacement for Module environment that supports all of > their features and much, much more, such as : > - module hierarchies > - module properties and color highlighting (we use it to higlight > bioinformatic modules or tools for example) > - module caching (very useful for a parallel filesystem with tons of > modules) > - path priorities (useful to make sure personal modules take precendence > over system modules) > - export module tree to json > > It works like a charm, understand both TCL and Lua modules and is actively > developped and debugged. There are litteraly new features every month or > so. If it does not do what you want, odds are that the developper will add > it shortly (I've had it happen). > > Maxime > > Le 2014-05-16 17:58, Douglas L Reeder a écrit : > > Ben, > > You might want to use module (source forge) to manage paths to different > mpi implementations. It is fairly easy to set up and very robust for this > type of problem. You would remove contentious application paths from you > standard PATH and then use module to switch them in and out as needed. > > Doug Reeder > On May 16, 2014, at 3:39 PM, Ben Lash <b...@rice.edu> wrote: > > My cluster has just upgraded to a new version of MPI, and I'm using an > old one. It seems that I'm having trouble compiling due to the compiler > wrapper file moving (full error here: http://pastebin.com/EmwRvCd9) > "Cannot open configuration file > /opt/apps/openmpi/1.4.4-intel/share/openmpi/mpif90-wrapper-data.txt" > > I've found the file on the cluster at > /opt/apps/openmpi/retired/1.4.4-intel/share/openmpi/mpif90-wrapper-data.txt > How do I tell the old mpi wrapper where this file is? > I've already corrected one link to mpich -> > /opt/apps/openmpi/retired/1.4.4-intel/, > which is in the software I'm trying to recompile's lib folder > (/home/bl10/CMAQv5.0.1/lib/x86_64/ifort). Thanks for any ideas. I also > tried changing $pkgdatadir based on what I read here: > > http://www.open-mpi.org/faq/?category=mpi-apps#default-wrapper-compiler-flags > > Thanks. > > --Ben L > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > > > _______________________________________________ > users mailing > listusers@open-mpi.orghttp://www.open-mpi.org/mailman/listinfo.cgi/users > > > > -- > --------------------------------- > Maxime Boissonneault > Analyste de calcul - Calcul Québec, Université Laval > Ph. D. en physique > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users > -- --Ben L
