Hi Gus: I went back and set the PATH and LD_LIBRARY_PATH following the FAQ answer. However, it did not change anything.
What else can you suggest? Thank you. Yuping -----Original Message----- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of Gus Correa Sent: Wednesday, July 24, 2013 8:28 PM To: Open MPI Users Subject: Re: [OMPI users] errors testing openmpi1.6.5 ---- Hi Yuping Did you set your PATH and LD_LIBRARY_PATH? Please, see these FAQ: http://www.open-mpi.org/faq/?category=running#run-prereqs http://www.open-mpi.org/faq/?category=running#adding-ompi-to-path I hope this helps, Gus Correa On 07/24/2013 08:09 PM, Yuping Sun wrote: > Dear All: > > I downloaded openmpi1.5.6 and installed on my linux workstation with > the help of NASA engineer. Then I tried to test the openmpi > installation, but get the following error message: > > [ysun@ysunrh mpi]$ which mpiexec > > /usr/local/openmpi1.6.5/bin/mpiexec > > [ysun@ysunrh mpi]$ mpiexec utils/MPIcheck/mpicheck > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_paffinity_hwloc: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_carto_auto_detect: > lt_dlerror() returned NULL! (ignored) > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_carto_file: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_mmap: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_posix: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_sysv: lt_dlerror() > returned NULL! (ignored) > > ---------------------------------------------------------------------- > ---- > > It looks like opal_init failed for some reason; your parallel process > is > > likely to abort. There are many reasons that a parallel process can > > fail during opal_init; some of which are due to configuration or > > environment problems. This failure appears to be an internal failure; > > here's some additional information (which may only be relevant to an > > Open MPI developer): > > opal_shmem_base_select failed > > --> Returned value -1 instead of OPAL_SUCCESS > > ---------------------------------------------------------------------- > ---- > > [ysunrh.fdwt.com:24905] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in > file runtime/orte_init.c at line 79 > > [ysunrh.fdwt.com:24905] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in > file orterun.c at line 694 > > I also try the use ompi_info to get more information, and it give me a > lot error messages and I listed some below: > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_osc_pt2pt: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_osc_rdma: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_self: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_sm: lt_dlerror() returned > NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_tcp: lt_dlerror() returned > NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_topo_unity: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_pubsub_orte: lt_dlerror() > returned NULL! (ignored) > > [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open > /usr/local/openmpi1.6.5/lib/openmpi/mca_dpm_orte: lt_dlerror() > returned NULL! (ignored) > > MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.6.5) > > MCA memory: linux (MCA v2.0, API v2.0, Component v1.6.5) > > MCA timer: linux (MCA v2.0, API v2.0, Component v1.6.5) > > MCA installdirs: env (MCA v2.0, API v2.0, Component v1.6.5) > > MCA installdirs: config (MCA v2.0, API v2.0, Component v1.6.5) > > MCA hwloc: hwloc132 (MCA v2.0, API v2.0, Component v1.6.5) > > Could anyone of you give me some help, and tell me what I need to do > to install openmpi correctly or give me some instructions to make it > working? Thank you. > > */Yuping Sun/* > > > FloDesign Wind Turbine Corp > > 242 Sturbridge Road > > Charlton, MA 01507 > Direct: 508-434-1507 > > Cell: 713-456-9420 > y...@fdwt.com <mailto:y...@fdwt.com> > > Description: cid:3300779197_294562 > > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users _______________________________________________ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users
