If you list the /usr/local/openmpi1.6.5/lib directory, do you see the 
referenced libraries?


On Jul 24, 2013, at 5:09 PM, Yuping Sun <y...@fdwt.com> wrote:

> Dear All:
>  
> I downloaded openmpi1.5.6 and installed on my linux workstation with the help 
> of NASA engineer. Then I tried to test the openmpi installation, but get the 
> following error message:
>  
> [ysun@ysunrh mpi]$ which mpiexec
> /usr/local/openmpi1.6.5/bin/mpiexec
> [ysun@ysunrh mpi]$ mpiexec utils/MPIcheck/mpicheck
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_paffinity_hwloc: lt_dlerror() 
> returned NULL! (ignored)
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_carto_auto_detect: lt_dlerror() 
> returned NULL! (ignored)
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_carto_file: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_mmap: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_posix: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24905] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_shmem_sysv: lt_dlerror() returned 
> NULL! (ignored)
> --------------------------------------------------------------------------
> It looks like opal_init failed for some reason; your parallel process is
> likely to abort.  There are many reasons that a parallel process can
> fail during opal_init; some of which are due to configuration or
> environment problems.  This failure appears to be an internal failure;
> here's some additional information (which may only be relevant to an
> Open MPI developer):
>  
>   opal_shmem_base_select failed
>   --> Returned value -1 instead of OPAL_SUCCESS
> --------------------------------------------------------------------------
> [ysunrh.fdwt.com:24905] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file 
> runtime/orte_init.c at line 79
> [ysunrh.fdwt.com:24905] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file 
> orterun.c at line 694
>  
>  
> I also try the use ompi_info to get more information, and it give me a lot 
> error messages and I listed some below:
>  
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_osc_pt2pt: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_osc_rdma: lt_dlerror() returned NULL! 
> (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_self: lt_dlerror() returned NULL! 
> (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_sm: lt_dlerror() returned NULL! 
> (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_btl_tcp: lt_dlerror() returned NULL! 
> (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_topo_unity: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_pubsub_orte: lt_dlerror() returned 
> NULL! (ignored)
> [ysunrh.fdwt.com:24920] mca: base: component_find: unable to open 
> /usr/local/openmpi1.6.5/lib/openmpi/mca_dpm_orte: lt_dlerror() returned NULL! 
> (ignored)
>            MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.6.5)
>               MCA memory: linux (MCA v2.0, API v2.0, Component v1.6.5)
>                MCA timer: linux (MCA v2.0, API v2.0, Component v1.6.5)
>          MCA installdirs: env (MCA v2.0, API v2.0, Component v1.6.5)
>          MCA installdirs: config (MCA v2.0, API v2.0, Component v1.6.5)
>                MCA hwloc: hwloc132 (MCA v2.0, API v2.0, Component v1.6.5)
>  
>  
> Could anyone of you give me some help, and tell me what I need to do to 
> install openmpi correctly or give me some instructions to make it working? 
> Thank you.
>  
>  
> Yuping Sun
> 
> FloDesign Wind Turbine Corp
> 242 Sturbridge Road
> Charlton, MA  01507
> Direct: 508-434-1507
> Cell: 713-456-9420 
> y...@fdwt.com
> <image001.jpg>
>  
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