Revision: 525
http://rpy.svn.sourceforge.net/rpy/?rev=525&view=rev
Author: lgautier
Date: 2008-05-14 22:21:26 -0700 (Wed, 14 May 2008)
Log Message:
---
Propagated the recent fix in RPy-1.x (case where R is compiled to use
already installed BLAS/LAPACK libraries)
(see thread
On Wed, May 14, 2008 at 5:50 PM, Gregory Warnes <[EMAIL PROTECTED]>
wrote:
>
> Is there a difference in the environment variables, particularly the value
> of RHOME?
>
> -G
>
No, RHOME are the same.
>
> On May 14, 2008, at 5:39PM , Manu Hack wrote:
>
> On Wed, May 14, 2008 at 4:49 PM, Gregory
Is there a difference in the environment variables, particularly the
value of RHOME?
-G
On May 14, 2008, at 5:39PM , Manu Hack wrote:
On Wed, May 14, 2008 at 4:49 PM, Gregory Warnes
<[EMAIL PROTECTED]> wrote:
Hmm.
Does rerunning the install make a difference?
-G
No, one more informati
On Wed, May 14, 2008 at 4:49 PM, Gregory Warnes <[EMAIL PROTECTED]>
wrote:
> Hmm.
>
> Does rerunning the install make a difference?
>
> -G
>
No, one more information is that when I was able to run it, on that
terminal, I can run it without problem. But in the other terminal, I can't
run it (gett
Hmm.
Does rerunning the install make a difference?
-G
On May 14, 2008, at 4:44PM , Manu Hack wrote:
Hi,
I just installed R and rpy on Opensuse 10.3. I managed to get it
work once. But then all of a sudden it won't work again. Here is
the info.
I compiled R-2.7.0 with configure --en
Hi,
I just installed R and rpy on Opensuse 10.3. I managed to get it work
once. But then all of a sudden it won't work again. Here is the info.
I compiled R-2.7.0 with configure --enable-R-shlib. And it's installed in
the standard location, /usr/local/lib64/R
$ls /usr/local/lib64/R/lib
libRb
Yea!
On May 14, 2008, at 3:08PM , Dirk Eddelbuettel wrote:
On Wed, May 14, 2008 at 02:36:27PM -0400, Gregory Warnes wrote:
> I just committed a change to use R CMD config LAPACK_LIBS. Can you
> check if it behaves properly?
I get the commit emails, so I just hand-applied the changes to the
On Wed, May 14, 2008 at 02:36:27PM -0400, Gregory Warnes wrote:
> I just committed a change to use R CMD config LAPACK_LIBS. Can you
> check if it behaves properly?
I get the commit emails, so I just hand-applied the changes to the two files.
Seems to work fine -- i.e. it built. So thumbs up!
I just committed a change to use R CMD config LAPACK_LIBS. Can you
check if it behaves properly?
-G
On May 14, 2008, at 1:14PM , Dirk Eddelbuettel wrote:
On Wed, May 14, 2008 at 01:06:38PM -0400, Gregory Warnes wrote:
> Too bad.
>
> I guess I'll have to either add code to look for
>
>
Revision: 524
http://rpy.svn.sourceforge.net/rpy/?rev=524&view=rev
Author: warnes
Date: 2008-05-14 11:33:26 -0700 (Wed, 14 May 2008)
Log Message:
---
remove completed TODO entry
Modified Paths:
--
trunk/rpy/TODO
Modified: trunk/rpy/TODO
===
Revision: 523
http://rpy.svn.sourceforge.net/rpy/?rev=523&view=rev
Author: warnes
Date: 2008-05-14 11:31:21 -0700 (Wed, 14 May 2008)
Log Message:
---
Use the 'R CMD config LAPACK_LIBS' command to determin the appropriate link
flags for lapack, instead of blindly assuming t
Anyway I tried to invoke the installation by:
python setup.py install (as root)
and all seems fine, just a warning during the plotting but the plot
is correct.
Many thanks
Ernesto
Il giorno 14/mag/08, alle ore 15:56, Gregory Warnes ha scritto:
Hi Ernesto,
These warning messages are nor
Support Requests item #1576013, was opened at 2006-10-12 11:49
Message generated for change (Comment added) made by warnes
You can respond by visiting:
https://sourceforge.net/tracker/?func=detail&atid=453022&aid=1576013&group_id=48422
Please note that this message will contain a full copy of the
Revision: 522
http://rpy.svn.sourceforge.net/rpy/?rev=522&view=rev
Author: lgautier
Date: 2008-05-14 10:51:40 -0700 (Wed, 14 May 2008)
Log Message:
---
Ooops. This one was not in for a good reason.
Removed Paths:
-
branches/rpy_nextgen/rpy/rinterface/__init
Revision: 521
http://rpy.svn.sourceforge.net/rpy/?rev=521&view=rev
Author: lgautier
Date: 2008-05-14 10:46:33 -0700 (Wed, 14 May 2008)
Log Message:
---
First stab at ensuring compatibility with the current RPy (1.x)
Added Paths:
---
branches/rpy_nextgen/rpy/rpy
Revision: 520
http://rpy.svn.sourceforge.net/rpy/?rev=520&view=rev
Author: lgautier
Date: 2008-05-14 10:44:12 -0700 (Wed, 14 May 2008)
Log Message:
---
missing file (should have be in SVN some time ago)
Added Paths:
---
branches/rpy_nextgen/rpy/rinterface/__ini
Revision: 519
http://rpy.svn.sourceforge.net/rpy/?rev=519&view=rev
Author: lgautier
Date: 2008-05-14 10:43:00 -0700 (Wed, 14 May 2008)
Log Message:
---
more tests
Modified Paths:
--
branches/rpy_nextgen/rpy/rinterface/tests/test_SexpClosure.py
branches/
Revision: 518
http://rpy.svn.sourceforge.net/rpy/?rev=518&view=rev
Author: lgautier
Date: 2008-05-14 10:41:25 -0700 (Wed, 14 May 2008)
Log Message:
---
- updated closing an embeddedR (looking at the corresponding test
in the R source tree)
- added missing DECREF
- Environme
On Wed, May 14, 2008 at 01:06:38PM -0400, Gregory Warnes wrote:
> Too bad.
>
> I guess I'll have to either add code to look for
>
> libRlapack.so
>
> in the appropriate directory. Know of any simple way to do this?
Glad you asked :) I remembered that 'R CMD ...' added the new command
'co
Revision: 517
http://rpy.svn.sourceforge.net/rpy/?rev=517&view=rev
Author: warnes
Date: 2008-05-14 10:10:57 -0700 (Wed, 14 May 2008)
Log Message:
---
Turn off debug build flag for default installs, add todo about Rlapack/lapack
Modified Paths:
--
trunk/rpy/
Too bad.
I guess I'll have to either add code to look for
libRlapack.so
in the appropriate directory. Know of any simple way to do this?
-G
On May 14, 2008, at 10:16AM , Dirk Eddelbuettel wrote:
Hi Greg,
On Wed, May 14, 2008 at 10:08:29AM -0400, Gregory. R. Warnes wrote:
>
> Hi
Revision: 516
http://rpy.svn.sourceforge.net/rpy/?rev=516&view=rev
Author: warnes
Date: 2008-05-14 10:05:47 -0700 (Wed, 14 May 2008)
Log Message:
---
Add note about checking for Rlapack
Modified Paths:
--
trunk/rpy/TODO
Modified: trunk/rpy/TODO
===
By the way, the default compilation for python modules is with
the flag -Wstrict-prototypes.
It used to generate a number of warnings, and after I reported
it on the r-devel list, it was solved (for R-2.7).
(well mostly, there is a last warning:
include/R_ext/Rdynload.h:26: warning: function declar
Hi Greg,
On Wed, May 14, 2008 at 10:08:29AM -0400, Gregory. R. Warnes wrote:
>
> Hi Dirk,
>
> Is it sufficient to simply add lapack to the list of libraries?
>
> libraries=['R','Rlapack','lapack']
Nice idea, but I'm afraid no cigar yet. From a test build I just launched:
[...]
gcc -p
Hi Dirk,
Is it sufficient to simply add lapack to the list of libraries?
libraries=['R','Rlapack','lapack']
-Greg
On May 13, 2008, at 9:38AM , Dirk Eddelbuettel wrote:
Hi Greg,
On 12 May 2008 at 23:54, Gregory. R. Warnes wrote:
| Hi All,
|
| I've just placed RPy 1.0.3 on SourceFor
Hi Ernesto,
These warning messages are normal, albeit annoying.I've just made
commited changes to the the SVN repository to avoid the ones from
rpymodule.c and io.c, so this should be less of a problem in the future.
-Greg
On May 14, 2008, at 3:34AM , Ernesto wrote:
Dear all,
I'm
Revision: 515
http://rpy.svn.sourceforge.net/rpy/?rev=515&view=rev
Author: warnes
Date: 2008-05-14 06:53:05 -0700 (Wed, 14 May 2008)
Log Message:
---
Minor changes to remove compilation warnings
Modified Paths:
--
trunk/rpy/src/RPy.h
trunk/rpy/src/io.c
Dear all,
I'm trying to install rpy on my Mac OS X 10.4. I currently use python
2.4 and R 2.5.1. I followed instructions found in the README file and
other past messagges. I went into the main rpy folder running the
following command:
python setup.py build
and I had the message:
RHOMES= [
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