Re: [R-sig-phylo] root in mvOU

2016-06-18 Thread Julien Clavel
Jarrod Hadfield; r-sig-phylo@r-project.org Objet : RE: [R-sig-phylo] root in mvOU Hi Jarod, In fact you can either choose a fixed root, or a draw from a multivariate normal with the stationary covariance (random root). I will change the name of the options in an upcoming release (and on gitHub) to mak

Re: [R-sig-phylo] root in mvOU

2016-03-04 Thread Julien Clavel
t;)) De : R-sig-phylo de la part de Jarrod Hadfield Envoyé : vendredi 4 mars 2016 07:45 À : r-sig-phylo@r-project.org Objet : [R-sig-phylo] root in mvOU Hi, I am unclear what assumptions are being made about the root values in mvOU, and was wonderin

[R-sig-phylo] root in mvOU

2016-03-03 Thread Jarrod Hadfield
Hi, I am unclear what assumptions are being made about the root values in mvOU, and was wondering if someone could clarify? For ease, imagine an OU1 model where there is one optimum per trait and so theta is a vector. Is the root value assumed to be theta, or a draw from a multivariate normal