Dear all,
I would like to print a few values with less digits than the default.
How I can reduce how many digits are printed ?(warning: not the real integer
resolution but what is shown in screen)
Best Regards
Alex
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Hi Alex,
See ?options in particular the "digits" section. You can (per
session) edit this by typing:
options(digits = 3)
or whatever number you want. To make this more permanent, create a
.Rprofile that alters the default digits.
HTH,
Josh
On Sat, May 28, 2011 at 12:36 AM, Alaios wrote:
>
Looks like you did not find the posting guide (see the footer of this
message). For compilation errors in contributed packages this is not
the correct list. As for
If I knew more about R, I might know how to keep that Rmpi.so file
around so that I could see if it is linked to a library that
Thanks a lot :)
--- On Sat, 5/28/11, Joshua Wiley wrote:
> From: Joshua Wiley
> Subject: Re: [R] reduce printing accuracy
> To: "Alaios"
> Cc: R-help@r-project.org
> Date: Saturday, May 28, 2011, 8:48 AM
> Hi Alex,
>
> See ?options in particular the "digits"
> section. You can (per
> sessio
On Fri, 27 May 2011, David Winsemius wrote:
On May 27, 2011, at 8:56 PM, Duncan Murdoch wrote:
but really, it's just a bug.
If you manually change that registry key, things are fine. If you ask
Windows dialogs to do it for you, it fails.
Most people pay infinitely more to Microsoft
Thanks for the help!
In the end, i chose to use ggplot which creates really simply different
panels.
And I am replacing my bars by simple points in the end.
Victor
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PLEASE
Hello i am new to ggplot and i observed a strange behavior.
I want to display two groups of points, each group with a different color.
But i encountered a problem with the colors.
Here is a first example:
dataset <- data.frame(Main = c("A", "A", "B", "B"), Detail = c( "b", "c", "1",
"2"), r
Dear expeRts,
I typically replace NA (but also other) entries in an ftable by a character
string containing LaTeX code for later use. I realized that replacing an entry
in one column also affects other columns; they are displayed all with the same
column width. Since the character string can be
Hi thanks,
The conventional method is solid (cross multiplication of patient years at
each age and year and gender, with the corresponding risk for death at each
age year and gender). I get about 26 expected deaths (verified by many
different sources)
Now what I am trying to do is get the same a
Dear Members,
I upgraded R from 2.12.2 to 2.13.0 (binary) on my WinXP and now I can't load
my workspaces. The error message is:
"Error: object âBICâ is not exported by 'namespace:nlme'"
I tried to load 'nlme' before loading workspace, it did not help...
Any idea to fix that?
Thank you in ad
Dear all,
another ftable problem, now related to formatC.
One typically would like to format entries in an ftable (adjust digits, replace
NA, ...)
before format() is applied to convert the formatted ftable to an object which
xtable can deal with. The output of xtable can then be used within a La
On May 28, 2011, at 7:19 AM, Marius Hofert wrote:
Dear all,
another ftable problem, now related to formatC.
One typically would like to format entries in an ftable (adjust
digits, replace NA, ...)
before format() is applied to convert the formatted ftable to an
object which
xtable can deal
On May 27, 2011, at 18:00 , frossard victor wrote:
> Dear R helpers,
> I would like to model temporal trend of biological remains in sediment cores.
> All samples are temporally auto-correlated and I would like to take this
> effect
> into account.
> Initially I thought that I could use AR(1)
On 28.05.2011 12:28, Vereszki-Varga Péter wrote:
Dear Members,
I upgraded R from 2.12.2 to 2.13.0 (binary) on my WinXP and now I can't load
my workspaces. The error message is:
"Error: object ‘BIC’ is not exported by 'namespace:nlme'"
I tried to load 'nlme' before loading workspace, it di
Received your offlist question and see that I did not understand your
request. See below for another alternative
On May 28, 2011, at 7:53 AM, David Winsemius wrote:
On May 28, 2011, at 7:19 AM, Marius Hofert wrote:
Dear all,
another ftable problem, now related to formatC.
One typically wou
Dear R-users,
I have the following problem. I have performed an experiment for which I
gathered a lot of data which I now want to test. The problem is that I
cannot find an appropriate test in R (I am a starter) and someone might give
me a hand. This is what I have done:
Across three sites (Site)
the question ask me to use gsub() and subsetting to remove the comma at the
end of the for all but the first value in a data frame.
the first few lines are like the following:
[1] "2177663,-41,175,2678248,6021224,1840,5,25,17,,,6,,"
"2177691,-39.6,176.2,2784798,6173592,1843,7,8,5,
Hi:
Essentially, you are asking for free statistical advice, which is not
within the intended scope of R-help. It's always better to consult
with someone locally, and as luck would have it, your university
apparently provides free statistical consulting for faculty and grad
students:
http://www.u
Can you be more specific about what a network builder is? and what do you
want exactly?
Your question seems a bit vague.
Best
Ronggui
On 28 May 2011 05:32, Weiwei Shi wrote:
> Hi there,
>
> I need a network builder and it can change the node size and color; I am
> not
> sure if network package
Homework question? This one's pretty easy; see
?regex
?gsub
A couple of examples on gsub()'s help page are rather close to what
you need. The basic structure is
gsub(, , name_of_string)
where the strings are enclosed in quotes. If you need to apply this
function to each row of your data frame,
Hi,
On Fri, May 27, 2011 at 5:32 PM, Weiwei Shi wrote:
> Hi there,
>
> I need a network builder and it can change the node size and color; I am not
> sure if network package in R can do this or not. The other functions I
> wanted have been found in that package.
>
> BTW, if there is another packa
Thanks, I'm going to update it!
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R-help@r-project.org m
Dear Dennis,
In my opinion I am not at all asking for any stats help, just a question how
to read this output.
Thanks, Bjorn
-
Dr. Bjorn JM Robroek
Ecology and Biodiversity Group
Institute of Environmental Biology, Utrecht University
Padualaan 8, 3584 CH Utrecht, The Netherlands
Email address
Hi there,
I am currently working on my dissertation which is about testing the
martingale hypothesis in the stock market using a methodology involving a
range of variance ratio tests and multiple variance ratio tests. I contacted
the author of a reference paper and I was told that the tests can be
Hi,
If you are not asking for stats help, then do you understand the model
and are just confused by how R labels it? We can help match R's
labels to the ones you are used to, if you tell us what you are used
to.
Cheers,
Josh
On Sat, May 28, 2011 at 6:54 AM, unpeatable wrote:
> Dear Dennis,
>
Thank you, Steve.
Initially I tried to choose b/w cytoscape and pajek, among other bunch of
software. I did not realize the existence of RCytoscape; otherwise, I would
probably use that one.
Weiwei
On Sat, May 28, 2011 at 9:25 AM, Steve Lianoglou <
mailinglist.honey...@gmail.com> wrote:
> Hi,
>
Hi all. Sorry for the long email. I have been trying to find someone local
to work on this with me, without much luck. I went in to our local stats
consulting service here, and the guy there told me that I already know more
about model selection than he does. :-< He pointed me towards ano
On May 28, 2011, at 10:58 AM, Chim Kaho wrote:
Hi there,
I am currently working on my dissertation which is about testing the
martingale hypothesis in the stock market using a methodology
involving a
range of variance ratio tests and multiple variance ratio tests. I
contacted
the author o
Actually I have another question relating to this,
I have about 300 nodes (I can reduced them somehow if the network is too
messy) and the similarity matrix between any two nodes. The size and color
of nodes have some meanings and I tried to use the layout to show their
"distance".
Here is the qu
Hello all,
I would like to use the train function from the caret package to
train a svm with a spectral kernel from the kernlab package. Sadly
a svm with spectral kernel is not among the many methods in caret...
using caret to train svmRadial:
--
library(caret)
library(kernlab)
d
Can anyone help with coding for Markov chain models. I have a data set from
coral reefs in consecutive years that have been given a state depending on
their coral and macroalgal cover. The markov model will be used to predict
the cover of coral and macroalgae in the future dependant on the conditio
> Date: Sat, 28 May 2011 09:33:03 -0700
> From: jwiley.ps...@gmail.com
> To: bjorn.robr...@gmail.com
> CC: r-help@r-project.org
> Subject: Re: [R] Nested design
>
> Hi,
>
> If you are not asking for stats help, then do you understand the model
> a
Hello everyone
I really need some help here. I made a confidence ellipse using the function
ellipse from the package ellipse:
ellipse(SD, centre=colMeans(pcsref),t=sqrt((p * (n-1)/(n-p))*qf(0.99, p,n-p))
Now, I want to write a function whom return TRUE or FALSE if a given
observation is in th
Hi Victor,
The problem is that you have not grasped the difference between
setting an aesthetic to a fixed value and mapping it to a variable.
See below for details.
On Sat, May 28, 2011 at 6:16 AM, Victor Gabillon
wrote:
> Hello i am new to ggplot and i observed a strange behavior.
>
> I want to
Hi again,
On Sat, May 28, 2011 at 1:03 PM, Weiwei Shi wrote:
> Actually I have another question relating to this,
>
> I have about 300 nodes (I can reduced them somehow if the network is too
> messy) and the similarity matrix between any two nodes. The size and color
> of nodes have some meanings
You can do pretty well without ggplot actually.
boxplot(Time~paste(Incidents,Months),data=DF,border=c('grey20','red'))
On Sat, May 28, 2011 at 2:55 AM, steven mosher wrote:
> Thanks,
>
> ggplot is on my list of things to learn before Hadley comes here to the
> bay area
> to give a session on i
Hi all,
Perhaps this is more of a unix question, but I'll give it a try here.
I am running 9 different R processes at the same time (called from a
shell script using R CMD BATCH). When I use the top program to
monitor how they are doing, it is impossible to tell which R process
is related to whic
Hi,
On Sat, May 28, 2011 at 2:48 PM, Matthew Keller wrote:
> Hi all,
>
> Perhaps this is more of a unix question, but I'll give it a try here.
> I am running 9 different R processes at the same time (called from a
> shell script using R CMD BATCH). When I use the top program to
> monitor how the
Hi Matt,
Not sure about renaming it but what about something like:
$ ps -aux | grep R
each process will have a unique PID that you can use to tell them
apart (possibly even the call that started it, but I am not presently
in a position to test and do not remember for certain).
HTH,
Josh
On Sa
Nice, Steve - I think this will work. I'll just call Sys.getpid() at
the top of each session and then look at the .Rout files to figure out
which is related to which...
On Sat, May 28, 2011 at 1:10 PM, Steve Lianoglou
wrote:
> Hi,
>
> On Sat, May 28, 2011 at 2:48 PM, Matthew Keller
> wrote:
>>
Dear all,
We would like to use our SMP system, HP Superdome (128 GB, 32 x 2-core Itanium)
the best possible way with R, especially to tackle problems involving large
matrices.
Any suggestion will be most appreciated.
H. Nüzhet Dalfes
Professor
Istanbul Technical University
and
Deputy Directo
To build on Robert's suggestion (which is very good to begin with), you might
consider using the vis.test function in the TeachingDemos package with the
vt.qqnorm function. This will create the qq plot of your data along with
several other qqplots of normal samples of the same size. If you can
The msm package may be of use to you.
-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On
Behalf Of phillowe
Sent: Saturday, May 28, 2011 10:51 AM
To: r-help@r-project.org
Subject: [R] Markov Chain model coding
Can anyone help with coding for Ma
There are point in polygon functions in some of the spatial packages that would
tell you if a point is within a polynomial approximation of the ellipse. But
in your case I would take a different approach. Generally confidence ellipses
are based on manhalobis distances, so you can just compute
Thanks Thomas.
On Sat, May 28, 2011 at 11:29 AM, Thomas Levine wrote:
> You can do pretty well without ggplot actually.
>
> boxplot(Time~paste(Incidents,Months),data=DF,border=c('grey20','red'))
>
> On Sat, May 28, 2011 at 2:55 AM, steven mosher
> wrote:
> > Thanks,
> >
> > ggplot is on my
Dear All,
I,m trying to fulfill a constraint nonparametric quantile regression
analysis for monthly stock index and gdp (159 cases of data) using rqss
function of quantreg package. I need to specify that stock prices are
nondecreasing with growing gdp.
I tried the following simple code
fit1<-
Hi,
I am using the "tm" package. When I try to use findfreqterms I get an error
message:
findfreqterms(dtm,2,5)
Error: could not find function "findfreqterms"
Obvious thing such as calling the "tm" library and a creating document term
matrix have been covered. I cannot find any dependencies th
Dear Sir,
I have data, coming from tests, consisting of 300 values. Is there a way in
R with which I can confirm this data to 68-95-99.8 rule or three-sigma rule?
I need to look around percentile ranks and prediction intervals for this
data. I, however, used SixSigma package and used ss.ci() f
Hi ...
Please could you help with probably a very simple problem I have. I'm
completely new to R and am trying to follow a tutorial using R for Force
Distribution Analysis that I got from ...
http://projects.eml.org/mbm/website/fda_gromacs.htm. Basically, the MDS I
preform outputs a force m
I do not know about what you are asking. But your thread was helpful for me
to workout some libsvm codes. Thank you for your help. Maybe we can interact
for more productive work.
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On May 28, 2011, at 2:21 PM, lloyd barcza wrote:
Hi,
I am using the "tm" package. When I try to use findfreqterms I get
an error message:
findfreqterms(dtm,2,5)
Error: could not find function "findfreqterms"
You are spelling it incorrectly.
Obvious thing such as calling the "tm" libra
On May 28, 2011, at 2:12 PM, Salil Sharma wrote:
Dear Sir,
I have data, coming from tests, consisting of 300 values. Is there a
way in
R with which I can confirm this data to 68-95-99.8 rule or three-
sigma rule?
Can you describe this rule? I get the idea that it might be "private
lan
Dear R-helpers,
I am trying to install the package "rgdal" using the command
install.packages("rgdal")
in R. I get the following error
"Error: proj_api.h not found.
If the PROJ.4 library is installed in a non-standard location,
use --configure-args='--with-proj-include=/opt/local/include'
for
Alex -
Notice that the error message says "Error: proj_api.h not found."
Files ending with a suffix of .h are known as header files, and
on Ubuntu, they are distributed in so-called development packages,
which generally end with -dev . So I'm guessing that you installed
the proj-bin package, an
On 29/05/11 05:45, Jessica Minkue wrote:
Hello everyone
I really need some help here. I made a confidence ellipse using the function
ellipse from the package ellipse:
ellipse(SD, centre=colMeans(pcsref),t=sqrt((p * (n-1)/(n-p))*qf(0.99, p,n-p))
Now, I want to write a function whom return TRUE
On 29/05/11 04:50, phillowe wrote:
Can anyone help with coding for Markov chain models. I have a data set from
coral reefs in consecutive years that have been given a state depending on
their coral and macroalgal cover. The markov model will be used to predict
the cover of coral and macroalgae in
Hello,
I hate to ask a question which is directly addressed in the documentation,
but can someone please give me an example of how to change the maximum
number of iterations used by lmer. I'm having a hard time understanding
this:
control a list of control parameters. See below for d
Hi Mitch,
Something like:
m <- lmer(Reaction ~ Days + (1|Subject) + (0+Days|Subject), sleepstudy,
control = list(maxIter = 1))
Hope this helps,
Josh
On Sat, May 28, 2011 at 6:05 PM, Downey, Patrick wrote:
> Hello,
>
> I hate to ask a question which is directly addressed in the documentation
Hi Greg, please forgive me as I could not understand one part of your
wishful reply. You said: "distributions where one is uniform between 0 and 1
with height 1; the other also has height 1 between 0 and 0.99, but is also 1
between 999.99 and 1000, zero elsewhere. " Can you be more specific on this
I am trying to read some data off the zillow site. Newbie to xml, html,
parsing and the xml package. I've been able to load the web page I'm
interested with the following code but I'm not sure of the next step to get
the information I'm interested in into R :
library(XML)
url <- "http://www.zillow
Is there an elegant way to do operations (+/-/*/ / ) on zoo/xts objects when
one serie is monthly (end of month) and the other daily (weekdays only) -
typically a monthly economic indicator and a stock index price?
Thanks,
TDB
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Hello list readers,
I am running a set of GLMs on fish spp presence/absence as a function of
various habitat characteristics. My response is binomial and I have four
predictors, three of which are categorical.
So, R takes one of my predictor-variables away to use as the intercept (the
first one
Hello
I want to use the test.nested.model, in order to compare two nested models,
which is under package EMA, however, I did not find it in the list of packages
to install in R. How is this possible?
Thanks for help in advance.
Rosario
__
R-help@r-pro
I replace the zlib1.dll in system32
C:\WINDOWS\system32\zlib1.dll
with the zlib1.dll in GTK2
D:\GTK2-Runtime\bin\zlib1.dll
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Hi Ashley,
It does not look like you have done the wrong thing to me. The
results will be different because eacho f the parameter estimates is
now the change from SS to ___ instead of from HH to . In fact,
from your first table, you can calculate all the parameters in the
second. The interc
Hi Rosario,
Can you provide the results of sessionInfo() ?
install.packages("EMA")
works for me.
Cheers,
Josh
On Sat, May 28, 2011 at 4:27 PM, Rosario Garcia Gil
wrote:
> Hello
>
> I want to use the test.nested.model, in order to compare two nested models,
> which is under package EMA, howe
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