On 29/05/11 04:50, phillowe wrote:
Can anyone help with coding for Markov chain models. I have a data set from
coral reefs in consecutive years that have been given a state depending on
their coral and macroalgal cover. The markov model will be used to predict
the cover of coral and macroalgae in the future dependant on the conditions
during the observation.

Any advice would be much appretiated.

Have a look at the CRAN packages:

    * msm

    * HiddenMarkov

    * hmm.discnp


    cheers,

            Rolf Turner

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