Re: [PyMOL] Pymol movie

2011-10-31 Thread Thomas Holder
Hi Guridis, you need to store object matrices with the "mview store" command and use "rotate" instead of "turn" (object versus camera rotation). And you should avoid "B" as object name, because it's the b-factor keyword in the PyMOL selection language. mset 1x100 frame 1 mview store, object=mo

Re: [PyMOL] Possible lighting bug

2011-10-31 Thread Jason Vertrees
Hi Stephen, Does set two_sided_lighting, on help? Can you please send me a small script that reproduces the effect? I just tried your simple lineSet example (with fixes shown below) and everything worked fine: python from pymol.cgo import * from pymol import cmd lineSet = [ LINEWIDTH, 0.30, \

Re: [PyMOL] Possible lighting bug

2011-10-31 Thread Stephen J. Bush
Hi Jason, Thanks for replying. Unfortunately, two sided lighting does not help. The example was just to show what I meant by CGO lines (I'm not sure how familiar everyone is with them). Here are links for 1) the *.py file that creates the objects shown in the images I previously provided and 2) t

Re: [PyMOL] Possible lighting bug

2011-10-31 Thread Jason Vertrees
Hi Stephen, This looks like a bug. Please file it on the open-source bug tracker and we'll look into it. Cheers, -- Jason On Mon, Oct 31, 2011 at 2:53 PM, Stephen J. Bush wrote: > Hi Jason, > > Thanks for replying. Unfortunately, two sided lighting does not help. The > example was just to show