Re: [PyMOL] Coloring structure by hydrophobicity

2006-12-13 Thread Peter Adrian Meyer
>Is there a good way to calculate and color residues by hydrophobicity > in > pymol? A google search showed only a very simple script that was based > entirely > on a single-residue lookup table. I'm looking at a set of structure > predictions, and it would be nice to easily see that a fold

[PyMOL] A little plugin

2006-12-13 Thread Raúl Mera
Dear pymolers, I just coded a quick and dirty (and also pretty slow), but functional (It have worked for me, at least) pymol plugin that takes a trajectory loaded in pymol and set the b-factor so the trajectory can be colored by frame (first frame blue, second frame green, etc, and last frame red)