ot;
> To: "pymol-users@lists.sourceforge.net" >
> Cc:
> Date: Wed, 8 Feb 2012 15:24:37 +0100
> Subject: [PyMOL] One liner for getting amino acid sequence from pdb file
> Hi.
>
> I have a pdb file, which is a modelled structure from another sequence.
>
> I want to check the amino
Thanks!
I put it on the wiki:
http://pymolwiki.org/index.php/Get_fastastr
Cheers
2012/2/8 Thomas Holder
> print cmd.get_fastastr('all')
>
> Cheers,
> Thomas
>
>
> On 02/08/2012 03:24 PM, Troels Emtekær Linnet wrote:
>
>> Hi.
>>
>> I have a pdb file, which is a modelled structure from another
print cmd.get_fastastr('all')
Cheers,
Thomas
On 02/08/2012 03:24 PM, Troels Emtekær Linnet wrote:
> Hi.
>
> I have a pdb file, which is a modelled structure from another sequence.
>
> I want to check the amino acid sequence in the structure.
> Does anyone know a one-liner in pymol which will e
Hi.
I have a pdb file, which is a modelled structure from another sequence.
I want to check the amino acid sequence in the structure.
Does anyone know a one-liner in pymol which will extract the sequence
in one-letter code?
best
Troels
