print cmd.get_fastastr('all')
Cheers,
Thomas
On 02/08/2012 03:24 PM, Troels Emtekær Linnet wrote:
> Hi.
>
> I have a pdb file, which is a modelled structure from another sequence.
>
> I want to check the amino acid sequence in the structure.
> Does anyone know a one-liner in pymol which will extract the sequence
> in one-letter code?
>
> best
> Troels
--
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen
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