Dear all,
I see that Schrodinger software supports Linux and Windows, while PyMol has
strong Apple roots and determination. How about the Mac future of PyMol ?
Best
Uwe Hobohm
--
Throughout its 18-year history, RSA
Thanks for the replies on my "How to spoil PyMol for modelling"
request. Despite Peitzsch's SwissModel (very convenient) and Sali's
Modeller (less convenient but perhaps more precise ?) I would like to
know, for educational purposes, whether PyMol could do reasonably well
also.
To be more pre
the
respective residues in S1 (maybe using a script that exploits the
mutate wizzard residue by residue ?) and do a final bond relaxation /
sidechain orientation / H-bond-length correction ?
Yes, I know, this is more than visualizing ...
Best regards
Uwe Hobohm
...Mac-mail did not propagate the message from out-folder to
sent-folder for unknown reasons.
Uwe
ert error: couldn't find basis for
inversion. The same applies when trying via command line (example for
residue one):
PyMOL> edit 1/ca
PyMOL> invert 1/n, 1/ca
invert error: couldn't find basis for inversion
What am I doing wrong ?
Kind regards
Uwe Hobohm
Heinz-Uwe Hobohm
ert error: couldn't find basis for
inversion. The same applies when trying via command line (example for
residue one):
PyMOL> edit 1/ca
PyMOL> invert 1/n, 1/ca
invert error: couldn't find basis for inversion
What am I doing wrong ?
Kind regards
Uwe Hobohm
Heinz-Uwe Hobohm
; some simple energy
minimization / bond relaxation; storing the resulting molecule in PDB-
format.
Can I hope ? Is this something others find useful as well ?
Best regards
Uwe Hobohm
up-to-date manual. As a
first aid I would like to have more examples in the single-command
descriptions.
If users from time to time would volunteer to add a few-line example to
individual commands would already be great help !
Best
Uwe Hobohm
PS: Poor Mac-Users would like support for
to folder pymol-0.86; sudo fink update-all
7) open X11-Terminal
8) start pymol: /sw/bin/pymol &
Best
Uwe Hobohm
