Re: [PyMOL] Quick PyMOL Autodock/Vina Plugin advice

2010-06-07 Thread Daniel Seeliger
GeekDad team up for the Ultimate > GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the > lucky parental unit. See the prize list and enter to win: > http://p.sf.net/sfu/thinkgeek-promo > ___ > PyMOL-users mailing list (Py

Re: [PyMOL] Autodock/vina plugin for pymol on MAC

2010-06-07 Thread Daniel Seeliger
umpy. > Error: unable to initialize plugin autodockā€ > > > > I read that Florian was able to install it successfully on Mac. Florian can > you please help me in this matter? Help from any other will also be highly > appreciated. > > > > Thank you !! > > >

Re: [PyMOL] Autodock plugin

2010-05-10 Thread Daniel Seeliger
ith a few lines of additional code and I'm therefore not putting any effort in this direction. Cheers, Daniel On Friday 07 May 2010 06:14:14 pm Michael Banck wrote: > Hi, > > On Tue, Feb 16, 2010 at 08:26:00PM +0100, Daniel Seeliger wrote: > > take a

Re: [PyMOL] PyMOL-users Digest, Vol 45, Issue 10

2010-02-19 Thread Daniel Seeliger
) > >> 3. Update & Submitting Bugs (Jason Vertrees) > >> 4. Re: Update & Submitting Bugs (Christoph Gohlke) > >> 5. Re: Update & Submitting Bugs (Jason Vertrees) > >> 6. Re: Update & Submitting Bugs (Christoph Gohlke) > >> 7. Regardi

Re: [PyMOL] Autodock plugin

2010-02-16 Thread Daniel Seeliger
ard Winning ZFS. Get Solaris 10 NOW > http://p.sf.net/sfu/solaris-dev2dev > ___ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive

Re: [PyMOL] Use of PyMOL for inspection and saving of docking results from Autodock

2010-02-15 Thread Daniel Seeliger
o save everything together in one pdb. file. I tried > with the "write complex.pdb" but it made a strange mess when i look with > other pdb viewers such as Viewerlite. > What can you suggest me to do? > > Thank you for the answers! > > Msev > -- Dr. Daniel Seel

Re: [PyMOL] Getting information fron selected objects

2010-01-21 Thread Daniel Seeliger
t (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Dr. Daniel Seeliger Co

Re: [PyMOL] Autodock/Vina Pymol Plugin Windows problem

2010-01-08 Thread Daniel Seeliger
te: > I can't seem to get the autodock Pymol plugin to work correctly in > Windows (XP). I think it's a bug somewhere. > I'm using the latest version of autodock grid and dock, and MGL Tools > 1.5.4 on Windows XP with Python25, and PyMol 1.2r1 > > I've emailed

Re: [PyMOL] 2. pymol autodock plugin (Daniel Seeliger)

2009-09-17 Thread Daniel Seeliger
@lists.sourceforge.net > > > > You can reach the person managing the list at > >pymol-users-ow...@lists.sourceforge.net > > > > When replying, please edit your Subject line so it is more specific > > than "Re: Contents of PyMOL-users digest..." > >

[PyMOL] pymol autodock plugin

2009-09-16 Thread Daniel Seeliger
tone [mailto:jedg...@mit.edu] > > Sent: Thursday, August 13, 2009 1:34 PM > > To: pymol-users@lists.sourceforge.net > > Subject: [PyMOL] pymol autodock plugin > > > > The autodock plugin written by Daniel Seeliger ceased to function > > (load) > > >

Re: [PyMOL] Pynmr plugin installation

2008-06-13 Thread Daniel Seeliger
ed Numeric > Error: unable to initialize plugin 'plug_nmr'. > > Does anybody have ever met this problem? Or can advice me some new > things to test as I have no more ideas to use the plugin? > > Thanks. > > Best Regards, > Cyril Gaudin. -- Dr. Daniel Seeliger Computational Biomolecular Dynamics Group Max-Planck-Institute for Biophysical Chemistry Am Fassberg 11 37077 Goettingen, Germany Tel: +49 551 201 2310 Fax: +49 551 201 2302 email: dsee...@gwdg.de www.mpibpc.mpg.de/groups/de_groot/dseelig/index.html

Re: [PyMOL] link residues with different number

2008-05-08 Thread Daniel Seeliger
va.sun.com/java >one ___ > PyMOL-users mailing list > PyMOL-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/pymol-users -- Dr. Daniel Seeliger Computational Biomolecular Dynamics Group Max-Planck-Institute for B