Re: [PATCH] gnu: r: Update to 3.3.1.

On Sun, Jul 31, 2016 at 01:49:00PM -0400, myglc2 wrote: > > I think what you're looking for in your hospital research lab is what > > Pjotr describes as a certain check-out of the Guix source tree. > > But it is not simple to use. It is to technical an approach to appeal to > the medical researche

Re: [PATCH] gnu: Add libgnomekbd.

ng0 skribis: > From 177706fe15b53a9b8ea3c053b878e6f0ed1fa8b9 Mon Sep 17 00:00:00 2001 > From: ng0 > Date: Sun, 31 Jul 2016 10:45:35 + > Subject: [PATCH] gnu: Add libgnomekbd. > > * gnu/packages/gnome.scm (libgnomekbd): New variable. [...] > +(inputs > + `(("gtk+" ,gtk+) > + (

Re: [PATCH 3/3] gnu: Add s6-linux-utils.

Eric Le Bihan skribis: > * gnu/packages/skarnet.scm (s6-linux-utils): New variable. [...] > +(description > + "s6-linux-utils is a set of minimalistic Linux-specific system > +utilities."))) Expounded a bit and pushed, thanks! Ludo’.

Re: [PATCH 2/3] gnu: Add s6-portable-utils.

Eric Le Bihan skribis: > * gnu/packages/skarnet.scm (s6-portable-utils): New variable. [...] > +(synopsis "Set of tiny general Unix utilities") Removed “Set of”… > +(description > + "s6-portable-utils is a set of tiny general Unix utilities, often > +performing well-known tasks su

Re: [PATCH 1/3] gnu: Add s6-rc.

Eric Le Bihan skribis: > * gnu/packages/skarnet.scm (s6-rc): New variable. Applied, thanks!

Re: [PATCH] add go@1.6

Hello! Matthew Jordan skribis: > From fbe9e4074cd27449d2337f62c7004993d087f6ba Mon Sep 17 00:00:00 2001 > From: Matthew Jordan > Date: Thu, 26 May 2016 09:16:48 -0400 > Subject: [PATCH] gnu: Add go@1.6. > > * gnu/packages/golang.scm (go-1.6): New variable. > > Co-author: Efraim Flashner > Co-a

Re: [PATCH] gnu: Add awesome.

On Sun, Jul 31, 2016 at 09:45:29PM +, ng0 wrote: > Leo Famulari writes: > > > On Fri, Jun 17, 2016 at 09:31:59AM +1000, Carlo Zancanaro wrote: > >> On 16 June 2016 at 22:38, Ludovic Courtès wrote: > >> > >> > Primarily, I built it with --rounds=2 as per > >> > < > >> > https://www.gnu.org/s

Re: [PATCH ?] gnu: Add dash.

On Sun, Jul 31, 2016 at 11:18:14PM +0200, Tobias Geerinckx-Rice wrote: > Indeed; thanks for adding that. dash is horrible for interactive use, > but fast at running shell[1] scripts. If anyone thinks that might be > relevant in the description, let me know. Nope, no suggestion from me :) I just wa

Re: [PATCH] gnu: Add awesome.

Leo Famulari writes: > On Fri, Jun 17, 2016 at 09:31:59AM +1000, Carlo Zancanaro wrote: >> On 16 June 2016 at 22:38, Ludovic Courtès wrote: >> >> > Primarily, I built it with --rounds=2 as per >> > < >> > https://www.gnu.org/software/guix/manual/html_node/Submitting-Patches.html> >> > ... >> >

Re: [PATCH] gnu: dmidecode: Update to 3.0.

ng0 writes: > Kei Kebreau writes: > >> ng0 writes: >> >>> Hi, >>> >>> Kei Kebreau writes: >>> A package for those who like to roam around the lower levels of their machines. As soon as this package is verified to build successfully and reproducibly on another user's machine, I c

Re: [PATCH ?] gnu: Add dash.

Hullo all, On Fri, Jul 29, 2016 at 02:44:27PM +, ng0 wrote: > Ludovic Courtès writes: >> I’d tend to remove “significantly” , but otherwise LGTM, thanks! > I second this. Significantly faster is subjectiv as long as we do not > provide some side by side benchmark results etc. Let's not give

Re: [PATCH] gnu: openttd: Update to 1.6.1.

On Sun, Jul 31, 2016 at 08:41:01PM +0200, Albin wrote: > Here is an update to the latest version of OpenTTD. I've also added the > following sentence to the package description: Pushed as eb3bd6762a2972773489551b0e247d0f5549a819 to master, with a slightly shortened commit message: There is no need

Re: [PATCH] gnu: dmidecode: Update to 3.0. (was: Re: [PATCH] gnu: Add dmidecode.)

Kei Kebreau writes: > ng0 writes: > >> Hi, >> >> Kei Kebreau writes: >> >>> A package for those who like to roam around the lower levels of their >>> machines. As soon as this package is verified to build successfully and >>> reproducibly on another user's machine, I can push it to the repos.

Re: [PATCH] gnu: dmidecode: Update to 3.0.

Hi, Kei Kebreau skribis: > I've attached a new patch. I don't know whether updating a version > number necessitates a copyright assignment, so I omitted it. You mean a copyright line (no copyright assignment here :-)). I’d argue it doesn’t require one. > From 0ddaeaeefbcc39143f3538448a37de974

Re: 'guix environment' as a build tool.

Hi! "Thompson, David" skribis: > On Sun, Jul 31, 2016 at 9:55 AM, Ludovic Courtès wrote: >> Conversely, useful metadata is missing: for instance, I’d like to add >> something that would allow me to specify the equivalent of ‘--network >> --expose=$HOME/.gdbinit’ in development environments I us

Re: [PATCH] gnu: dmidecode: Update to 3.0. (was: Re: [PATCH] gnu: Add dmidecode.)

ng0 writes: > Hi, > > Kei Kebreau writes: > >> A package for those who like to roam around the lower levels of their >> machines. As soon as this package is verified to build successfully and >> reproducibly on another user's machine, I can push it to the repos. >> >> From 37c3cc1021671d93dca2c3

Re: [PATCH] gnu: Add dmidecode.

Hi, Kei Kebreau writes: > A package for those who like to roam around the lower levels of their > machines. As soon as this package is verified to build successfully and > reproducibly on another user's machine, I can push it to the repos. > > From 37c3cc1021671d93dca2c34c4d3b392173b84ef1 Mon Se

[PATCH] gnu: openttd: Update to 1.6.1.

Hi! Here is an update to the latest version of OpenTTD. I've also added the following sentence to the package description: "This package only includes the game engine. When you start it you will be prompted to download a graphics set." All the best, Albin From ee8cc850a3f60b1a7d94545b2dc333c8d

[PATCH] gnu: Add dmidecode.

A package for those who like to roam around the lower levels of their machines. As soon as this package is verified to build successfully and reproducibly on another user's machine, I can push it to the repos. From 37c3cc1021671d93dca2c34c4d3b392173b84ef1 Mon Sep 17 00:00:00 2001 From: Kei Kebrea

Re: [WIP v0.1 0/8] KDE framework 5, tier 1

> Unfortunatly I have not time ATM for working on this. Feel free to pick > up and complete it. (I'd be happy if you'd take over :-) Thanks for the info =)

Re: Ecl

On Sun, Jul 31, 2016 at 01:25:10PM -0400, Andy Patterson wrote: > This patch should address the issue. It's for core-updates. I've tested > it locally. Just pushed, thanks a lot! Andreas

Re: [PATCH 8/8] services: Add spice vdagent service.

> If spice-vdagend produces a PID file, make sure to use #:pid-file here > (there are several examples in the tree), which often provides more > reliable startup notification. spice-vdagentd doesn't create a pid file itself. [0] [1] I haven't updated the documentation yet because I'm running into

Re: [PATCH] gnu: r: Update to 3.3.1.

Roel Janssen writes: >> On Sat, Jul 30, 2016 at 03:41:50PM -0400, myglc2 wrote: >>> I can assure you that if our users do guix pull and invisibly get a new >>> R release, their analyses will from time to time break. So we may want a >>> simple way for them to back down to a previous release. So..

Re: [PATCH] gnu: r: Update to 3.3.1.

myglc2 writes: > Pjotr Prins writes: > >> On Sat, Jul 30, 2016 at 03:41:50PM -0400, myglc2 wrote: >>> The workaround used by sysops where I work (hospital research lab) is to >>> give notice of R upgrades and to make previous releases available for >>> reference by ongoing projects. IMO, we shou

Re: Ecl

On Sun, 31 Jul 2016 12:00:25 +0200 Andreas Enge wrote: > Yet another package which fails on all architectures: >http://hydra.gnu.org:3000/build/1313690 > If someone is interested in it, please have a look. This patch should address the issue. It's for core-updates. I've tested it locally. A

Re: [PATCH] gnu: r: Update to 3.3.1.

Pjotr Prins writes: > On Sat, Jul 30, 2016 at 03:41:50PM -0400, myglc2 wrote: >> The workaround used by sysops where I work (hospital research lab) is to >> give notice of R upgrades and to make previous releases available for >> reference by ongoing projects. IMO, we should consider how the guix

Re: [PATCH] gnu: r: Update to 3.3.1.

l...@gnu.org (Ludovic Courtès) writes: > myglc2 skribis: > >> I can assure you that if our users do guix pull and invisibly get a new >> R release, > > They need to to ‘guix pull’ *and* ‘guix package -u’. > >> their analyses will from time to time break. So we may want a simple >> way for them to

Re: Python-pathlib

Am 31.07.2016 um 11:28 schrieb Andreas Enge: > So should we drop python-pathlib and keep only python2-pathlib? +1 -- Schönen Gruß Hartmut Goebel Dipl.-Informatiker (univ), CISSP, CSSLP, ISO 27001 Lead Implementer Information Security Management, Security Governance, Secure Software Development

Re: [WIP v0.1 0/8] KDE framework 5, tier 1

Am 31.07.2016 um 18:33 schrieb Hartmut Goebel: > Please note there are more branches (kf5-tier-2, kde-tier-3, kde-tier-4, > kf5-porting-aids) where I prepared packages for the other tiers. I should have added: I used the branches so I could plain stupidity add all packages first, amending and edit

Re: [WIP v0.1 0/8] KDE framework 5, tier 1

Am 30.07.2016 um 11:14 schrieb Andreas Enge: > I would suggest to order the packages in kde-frameworks.scm according to the > different "tiers", and to add a comment when a new tier is started, similarly > to the comments in xorg.scm. There is already one package there that was That's exactly what

Re: ‘guix publish’ as a content-addressed file server

Hello, l...@gnu.org (Ludovic Courtès) skribis: > Until now, if hydra.gnu.org had a source file in its store (the result > of an ‘origin’), you could get it via substitutes. However, with > substitutes disabled, hydra.gnu.org was of no help, even though it did > have the source file. > > Commit f

Re: [WIP v0.1 0/8] KDE framework 5, tier 1

Am 30.07.2016 um 00:37 schrieb David Craven: > Are you still working on these patches? Unfortunatly I have not time ATM for working on this. Feel free to pick up and complete it. (I'd be happy if you'd take over :-) Please note there are more branches (kf5-tier-2, kde-tier-3, kde-tier-4, kf5-port

Re: [PATCH} Add RAID devices.

On Sun, Jul 31, 2016 at 12:12:02PM -0400, myglc2 wrote: > Thanks, I tried that. the 'guix system reconfigure' succeeds and starts > the raid array (please see system35.scm & system35.log, attached). > > But the reboot hangs at: > > [...] clocksource: Switched to clocksource tsc No idea. The only

Re: Isnan

On Sun, Jul 31, 2016 at 04:53:49PM +0200, Andreas Enge wrote: > And rapicorn: >http://hydra.gnu.org:3000/build/1345676/nixlog/1/tail-reload Fixed in commit 42bf34298eec19b37e276e49074113f29c494aed. Andreas

Re: [PATCH} Add RAID devices.

Andreas Enge writes: > On Sat, Jul 30, 2016 at 07:05:25PM -0400, myglc2 wrote: >> > I might write a more detailed blog post about this; there is a little >> > subtlety with the non-automatic determination of dependencies between >> > devices, so one needs to make sure that the partitions to be as

Re: Isnan

On Sun, Jul 31, 2016 at 04:42:35PM +0200, Andreas Enge wrote: > It finished successfully. The next package with the same problem is synfig, And rapicorn: http://hydra.gnu.org:3000/build/1345676/nixlog/1/tail-reload Andreas

Re: Isnan

On Sun, Jul 31, 2016 at 01:06:07PM +0200, Andreas Enge wrote: > I am just looking at the reports on hydra. Dealii compiles in master, but not > in core-updates. (I am trying to update to 8.4.1; so far, the build process > goes beyond where it fails in the current version.) It finished successfully

Re: 'guix environment' as a build tool.

On Sun, Jul 31, 2016 at 9:55 AM, Ludovic Courtès wrote: > Hello! > > "Thompson, David" skribis: > >> On Sat, Jul 30, 2016 at 10:05 PM, Mathieu Lirzin wrote: >>> l...@gnu.org (Ludovic Courtès) writes: > > [...] > What about providing a ‘guix.scm’ file that people could pass to ‘guix env

Re: 'guix environment' as a build tool.

Hello! "Thompson, David" skribis: > On Sat, Jul 30, 2016 at 10:05 PM, Mathieu Lirzin wrote: >> l...@gnu.org (Ludovic Courtès) writes: [...] >>> What about providing a ‘guix.scm’ file that people could pass to ‘guix >>> environment -l’ (instead of typing the long command above), and to ‘guix >

[patch] python-numpy, python-matplotlib and openblas update, python-cycler added

Pjotr Prins writes: > Attached bumping of python-numpy, openblas and python-matplotlib. New > package python-cycler. > [...] > - matplotlib and ipython now have a circular dependency - so I removed > one and had to disable document generation for matplotlib We value documentation and welcome e

Re: [PATCH] gnunet-svn, gnunet-gtk-svn

ng0 writes: > This is functional, but it suffers the same bug as the gnunet-0.10.1 > package. I will write a gnunet-service for guix which will fix all > versions. > The expected behavior for installing gnunet is: create gnunet user with > gnunet group, create gnunet-dns group, build, install, co

Re: [GSoC] Continuous integration tool à la Hydra.

Hi, Florian Paul Schmidt writes: > On 07/29/2016 09:26 PM, Mathieu Lirzin wrote: >>> To get pkg-config, see . >>> See `config.log' for more details >> >> I have tested successfully with the following command on a foreign >> system: >> >> guix environment -

Re: [patch] python-numpy, python-matplotlib and openblas update, python-cycler added

Hello, On Sun, Jul 31, 2016 at 01:40:11PM +0200, Pjotr Prins wrote: > PS I thought using texlive-minimal was a good idea. Ignore those if > you think it is not supposed to be. It may be the reason the PDFs > disappeared. well, if the documentation does not build, then it might be a better idea to

[patch] python-numpy, python-matplotlib and openblas update, python-cycler added

Hi Ricardo, I ran into the eigen issue of numpy+openblas. See https://github.com/xianyi/OpenBLAS/issues/703 The good news is that openblas now appears to have fixed eigen support. It was broken on numpy and the upgrades fixed the segfaults. Attached bumping of python-numpy, openblas and python-

Re: [PATCH v5 01/17] gnu: Add perl-db-file.

On Thu, 28 Jul 2016 23:38:17 +0200 Danny Milosavljevic wrote: > gnu: Add perl-db-file. > > * gnu/packages/databases.scm (perl-db-file): New variable. > --- > gnu/packages/databases.scm | 32 > 1 file changed, 32 insertions(+) This part has already been pushed (

Re: Call for screencasts!

Hello! With help from Mark, the video is now on-line: https://www.gnu.org/software/guix/ Of course there’s room for improvement, so if anyone would like to prettify the video, add more demos, or anything, this is welcome! Ludo’.

Re: PATCH [0/22]: Add roary.

Hello, Ben Woodcroft skribis: > This patchset adds roary, a pipeline which at times is used for tracking > outbreaks of pathogenic bacteria in e.g. foodstuffs or hospitals, by comparing > whole genome sequences. I looked briefly at this series and I guess you can take into account Leo’s comment

Re: Shepherd fails on core-updates

Andreas Enge skribis: > Something embarrassing: > shepherd does not build on arm in core-updates: >http://hydra.gnu.org:3000/build/1246005 This is a non-deterministic test failure: http://bugs.gnu.org/23811 Ludo’.

Re: 'guix environment' as a build tool.

Hello, Mathieu Lirzin skribis: > l...@gnu.org (Ludovic Courtès) writes: > >> Mathieu Lirzin skribis: >> >>> I have tested successfully with the following command on a foreign >>> system: >>> >>> guix environment --ad-hoc automake pkg-config guile guix libgcrypt sqlite >>> guile-sqlite3 >>> >

Re: Isnan

On Sun, Jul 31, 2016 at 12:44:27PM +0200, Danny Milosavljevic wrote: > > Apparently the "std::" is missing in front of "isnan"; should this not be > > implicit? > No. Many people in the C++ community frowns upon even doing "using namespace > std" at all, never mind implicitly. > http://stackoverf

Re: Code formatting

Danny Milosavljevic skribis: >> Bonus to whoever posts indentation rules for their favorite editor! :-) > > Is there a standalone program that reformats Scheme code to what we want it > to be? There’s Emacs, which can be invoked for batch processing. I’m not sure what the right incantation i

Re: WIP: neomutt. segfaulting outside of gdb, functional inside.

On Fri, 29 Jul 2016 14:56:37 + ng0 wrote: > Tomáš Čech writes: > > > On Fri, Jun 24, 2016 at 04:04:43PM +, ng0 wrote: > >>In gnu/packages/mail.scm I created this package. > >>It builds succesfully, but when I run it, it segfaults. > >>Running it in gdb however makes it succeed and not

[PATCH] gnu: Add libgnomekbd.

The author(?) in 2012 wrote: "Libgnomekbd is a dead man walking – the only useful thing is the keyboard drawing widget, that should be incorporated into gnome-control-center in 3.8." This library has been tested in my GNOME system by clicking the tastatur layout in the right corner, open drop down

Re: Isnan

> Apparently the "std::" is missing in front of "isnan"; should this not be > implicit? No. Many people in the C++ community frowns upon even doing "using namespace std" at all, never mind implicitly. http://stackoverflow.com/questions/1265039/using-std-namespace If you include math.h , isnan

Re: Code formatting

On Sun, Jul 31, 2016 at 12:34:12PM +0200, Danny Milosavljevic wrote: > Is there a standalone program that reformats Scheme code to what we want it > to be? > It would be best if such a program just automatically normalized all the > files for us. There's no reason this needs to stay a degree of

Isnan

Hello, has anyone followed what the deal is with isnan in core-updates? A number of C++ packages does not build any more. For instance, dealii: solver_control.cc:96:24: error: ‘isnan’ was not declared in this scope isnan(check_value) || ^ [ 30%] Building CXX object

Re: Code formatting

> Bonus to whoever posts indentation rules for their favorite editor! :-) Is there a standalone program that reformats Scheme code to what we want it to be? It would be best if such a program just automatically normalized all the files for us. There's no reason this needs to stay a degree of

Ecl

Yet another package which fails on all architectures: http://hydra.gnu.org:3000/build/1313690 If someone is interested in it, please have a look. Andreas

IR source disappeared

Hello, the web site for IR disappeared and with it the source code: http://hydra.gnu.org:3000/build/1325922 While looking at the Debian package, I also noticed that their package is called "...dfsg...", which usually indicates a freedom problem with part of the source code. From what I underst

Re: [PATCH] gnu: r: Update to 3.3.1.

> On Sat, Jul 30, 2016 at 03:41:50PM -0400, myglc2 wrote: >> The workaround used by sysops where I work (hospital research lab) is to >> give notice of R upgrades and to make previous releases available for >> reference by ongoing projects. IMO, we should consider how the guix R >> recipe(s) might

Python-pathlib

Hello, python-pathlib is one of the other packages that fails on core-updates. I am reading on its home page: https://pypi.python.org/pypi/pathlib/ : "Requirements Python 3.2 or later is recommended, but pathlib is also usable with Python 2.7 and 2.6. Install In Python 3.4, pathlib is now pa

Re: Shepherd fails on core-updates

On Sun, Jul 31, 2016 at 10:03:32AM +0200, Andreas Enge wrote: > shepherd does not build on arm in core-updates: >http://hydra.gnu.org:3000/build/1246005 Well, in an effort to provide the logs of the failing tests, I compiled on my novena, and the tests do pass! I will restart it once again. T

Re: [PATCH] gnu: r: Update to 3.3.1.

Hello, On Sat, Jul 30, 2016 at 04:36:22PM +0200, Roel Janssen wrote: > Is it OK to upgrade? maybe wait until after the core-updates merge? Andreas

Re: [PATCH} Add RAID devices.

On Sat, Jul 30, 2016 at 07:05:25PM -0400, myglc2 wrote: > > I might write a more detailed blog post about this; there is a little > > subtlety with the non-automatic determination of dependencies between > > devices, so one needs to make sure that the partitions to be assembled > > are present befo

[PATCH 3/3] gnu: Add s6-linux-utils.

* gnu/packages/skarnet.scm (s6-linux-utils): New variable. Signed-off-by: Eric Le Bihan --- gnu/packages/skarnet.scm | 31 +++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/skarnet.scm b/gnu/packages/skarnet.scm index c41f290..ef85f8b 100644 --- a/gnu/pa

Shepherd fails on core-updates

Something embarrassing: shepherd does not build on arm in core-updates: http://hydra.gnu.org:3000/build/1246005 Andreas

Re: Glibc-locales failure in core-updates

On Sun, Jul 31, 2016 at 10:56:50AM +0800, 宋文武 wrote: > > glibc-locales fails on all architectures in core-updates. The error message > > looks as if it would not be too difficult to fix for someone who knows > > the package... > Fixed, thanks for noticing! Great, thanks a lot! Andreas

Re: [GSoC] Continuous integration tool à la Hydra.

Hi! On 07/29/2016 09:26 PM, Mathieu Lirzin wrote: >> To get pkg-config, see . >> See `config.log' for more details > > I have tested successfully with the following command on a foreign > system: > > guix environment --ad-hoc automake pkg-config guile guix l