Is this problem resolved? There is a new version here
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mni152reg
On 06/16/2016 11:05 AM, Leila Reddy wrote:
> Hi FS Experts,
>
> I'm trying to use the mni152reg command but I get an error that --lta
> is not recognized.
>
> It appears t
Try now
On 06/15/2016 06:30 PM, Leila Reddy wrote:
> Hi Doug,
>
> Thanks for your reply.
>
> When I run mni152reg I get an error : ERROR: Flag --lta unrecognized
>
> I'm using v 1.9 of this file.
>
> I found a post that said to download a newer version from here:
> ftp://surfer.nmr.mgh.harvard.edu
Hi FS Experts,
I'm trying to use the mni152reg command but I get an error that --lta is not
recognized.
It appears that fslregister doesn't have this option. There was a previous post
about this
problemhttp://www.mail-archive.com/freesurfer%40nmr.mgh.harvard.edu/msg41953.html
but I can't figure
Hi Doug,
Thanks for your reply.
When I run mni152reg I get an error : ERROR: Flag --lta unrecognized
I'm using v 1.9 of this file.
I found a post that said to download a newer version from here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mni152reg
but it doesn't seem to be
You'll need a registration that goes from the functional to the mni152.
This has to be done in two steps,
1. Run mni152reg --s subject to create the anat-to-mni152 registration
(needs FSL)
2. Run bbregister to get the anat-to-func reg (in lta format)
3. then combine them with mri_concatenate_
