tmail.com
CC: al.hang...@yahoo.ca; Freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] FW: longitudinal analysis
Hi Paul,
also, is this happening in the -base run or in one of the -long
runs (or in all of the -long runs of that subject). What binary
is running so slowly (you mentioned some output "labe
eg from
>> /home/k0933235/paul/PREDEP_Structural/subjects2/PREDEP46C_fsf.long.PREDEP46_template/mri/aseg.mgz
>>
>> ASeg Vox2RAS: ---
>>
>> -1.000 0.000 0.000 128.000;
>>
>> 0.000 0.000 1.000 -128.000;
>>
>> 0.000 -1.000 0.000 128.000;
>>
.000 0.000 1.000;
>
> -
>
> Labeling Slice
>
> 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
>
> 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39
>
> 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59
> ##
.000;
>
> 0.000 -1.000 0.000 128.000;
>
> 0.000 0.000 0.000 1.000;
>
> -
>
> Labeling Slice
>
> 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
>
> 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39
>
> 40 41 42 43 44 45 46 47 48 49 50 5
2013 14:59:06 -0500
From: mreu...@nmr.mgh.harvard.edu
To: horton_p...@hotmail.com
CC: al.hang...@yahoo.ca; Freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] FW: longitudinal analysis
Hi Paul,
also, is this happening in the -base run or in one of the -long runs
Hi Paul,
also, is this happening in the -base run or in one of the -long runs (or
in all of the -long runs of that subject). What binary is running so
slowly (you mentioned some output "labelling slice", can you scroll up
in the log and see what exactly is running)?
Best, Martin
On 01/18/20
how much RAM do you have in the machine? And are there other processes
running at the same time? How many timepoints does the subject have?
Bruce
On Fri,
18 Jan 2013, paul horton wrote:
Hi Alex,
Thanks for your reply.
I am also using Linux. I have restarted the analysis a few times but
Hi Alex,
Thanks for your reply.
I am also using Linux. I have restarted the analysis a few times but the
process for this particular subject is very slow. When I try the same analysis
on a different subject using the same machine, it only takes a few hours. So
not sure why the analysis is h
Hi Paul,
I also had such problems previously. My initial analyses were performed
on mac. Though it might seem strange, some analyses resolved after I
just restarted the computer. Other ones I analysed on centos. Now I am
doing all the recons on linux.
best wishes,
Alex.
Le 1/18 9:22, pau
