Hi Alex, Thanks for your reply.
I am also using Linux. I have restarted the analysis a few times but the process for this particular subject is very slow. When I try the same analysis on a different subject using the same machine, it only takes a few hours. So not sure why the analysis is having problems with this particular subject. Best wishes Paul On 18 Jan 2013, at 16:40, "Alex Hanganu" <al.hang...@yahoo.ca> wrote: > Hi Paul, > > I also had such problems previously. My initial analyses were performed on > mac. Though it might seem strange, some analyses resolved after I just > restarted the computer. Other ones I analysed on centos. Now I am doing all > the recons on linux. > > best wishes, > > Alex. > > > > Le 1/18 9:22, paul horton a écrit : >> >> >> > Date: Fri, 18 Jan 2013 08:54:48 -0500 >> > From: fis...@nmr.mgh.harvard.edu >> > To: horton_p...@hotmail.com >> > Subject: RE: [Freesurfer] longitudinal analysis >> > >> > Hi Paul >> > >> > can you cc the list so that others can answer? >> > >> > thanks >> > Bruce >> > On Fri, 18 Jan 2013, paul >> > horton wrote: >> > >> > > Hi Brian, >> > > >> > > Thanks for your reply. >> > > >> > > I am running freesurfer 4.5.0. We are using the older version so that >> > > the >> > > analyses performed are the same across subjects. >> > > >> > > Best wishes >> > > >> > > Paul >> > > >> > > Date: Fri, 18 Jan 2013 08:21:05 -0500 >> > > From: fis...@nmr.mgh.harvard.edu >> > > To: horton_p...@hotmail.com >> > > CC: freesurfer@nmr.mgh.harvard.edu >> > > Subject: Re: [Freesurfer] longitudinal analysis >> > > >> > > Hi Paul >> > > >> > > what is the actual binary being run? >> > > >> > > Bruce >> > > On Fri, 18 Jan 2013, paul horton wrote: >> > > >> > > > Hi guys, >> > > > >> > > > I am currently running a longitudinal analysis on a set of scan. It is >> > > > currently running and so far it has taken 5 days. It seems to be >> > > > taking a >> > > > large amount of time on a process called labelling slice. I have run >> > > > the >> > > > same analysis on other subjects which took about 6 hours to complete. >> > > > So >> > > I >> > > > was wondering if you know of any reason why a set of scans would take >> > > > long >> > > er >> > > > to process than others. I have checked the inital scans and nothing >> > > > seems >> > > > obviously wrong with them. >> > > > >> > > > Best Wishes >> > > > >> > > > Paul >> > > > >> > > > >> > > >> > > _______________________________________________ Freesurfer mailing list >> > > Freesurfer@nmr.mgh.harvard.edu >> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The >> > > information >> > > in this e-mail is intended only for the person to whom it is addressed. >> > > If >> > > you believe this e-mail was sent to you in error and the e-mail contains >> > > patient information, please contact the Partners Compliance HelpLine at >> > > http://www.partners.org/complianceline . If the e-mail was sent to you in >> > > error but does not contain patient information, please contact the sender >> > > and properly dispose of the e-mail. >> > > >> > > >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail.
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_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
