Re: [Freesurfer] Converting thickness maps to vtk

2011-12-12 Thread Navid Shiee
What I need is basically both. I used the mris_convert command similar to your suggestion to get the inner and pial surfaces before. Now what I need, is the thickness values on each coordinate of the surface in vtk format. Do you know how to create this? Thanks, On Mon, Dec 12, 2011 at 3:47 PM,

Re: [Freesurfer] Converting thickness maps to vtk

2011-12-12 Thread Derin Cobia
Navid, Are you needing to convert the thickness.mgh file or a surface (e.g., ?h.pial, ?h.white, etc) file to .vtk? We've used mris_convert many times to create .vtk files from FS surfaces. The command is fairly straightforward. mris_convert /?h. /?h..vtk I'm not sure you can convert the th