i guess all thats needed then is for -showedits to print the table
(which it does now, for the next release) and for mri_info to show the
table if its embededed (i'll add that).
N.
On Tue, 2012-01-31 at 22:02 -0500, Bruce Fischl wrote:
> I think the .mgz format supports an embedded color table
>
I think the .mgz format supports an embedded color table
On Jan 31, 2012, at 9:52 PM, "Michael Harms" wrote:
>
> The weird thing (given your description) is that I was in fact seeing the
> label names in tkmedit (e.g., "wm-ON"), even though that information is
> not in FreeSurferColorLUT.txt
The weird thing (given your description) is that I was in fact seeing the
label names in tkmedit (e.g., "wm-ON"), even though that information is
not in FreeSurferColorLUT.txt. So, it appears that perhaps 'tkmedit' is
indeed set-up to read the labels that are embedded in the edits.mgz
file...?
t
Mike,
thanks for pointing out that bug, i've fixed it for the next release.
per the edits.mgz, i see now that the colortable should be printed when
mri_compile_edits is run (actually, its embedded in the edits.mgz file,
but tkmedit is not setup to read it). so this is the table it ought to
print
Hi Nick,
I found a small bug in recon-all that prevents the -showedits flag from
working in conjunction with expert-options:
Line 785 in recon-all of v5.1 currently has an extraneous closing
parenthesis:
if (-e $XOptsFile)) then
but should be:
if (-e $XOptsFile) then
Also, I'm puzzled
