v5.0.0 is too old. I'd suggest grabbing the current 5.1.0 build and
then just using the 'mri_annotation2label' from that.
On Thu Feb 28 12:17:02 2013, Sudhin A. Shah wrote:
> freesurfer-Linux-centos4_x86_64-stable-pub-v5.0.0
>
>
> On Feb 28, 2013, at 12:12 PM, Rudolph Pienaar wrote:
>
>> It loo
freesurfer-Linux-centos4_x86_64-stable-pub-v5.0.0
On Feb 28, 2013, at 12:12 PM, Rudolph Pienaar wrote:
> It looks like you might be running a too-old version of
> mri_annotation2label. What FS build/version are you running?
>
>
> On Thu Feb 28 11:36:50 2013, Sudhin A. Shah wrote:
>> Hi I got
It looks like you might be running a too-old version of
mri_annotation2label. What FS build/version are you running?
On Thu Feb 28 11:36:50 2013, Sudhin A. Shah wrote:
> Hi I got an error -lobesStrict unknown. I am running mri_annotation2label
> version stable5.
>
> Is there a workaround?
>
> O
Hi I got an error -lobesStrict unknown. I am running mri_annotation2label
version stable5.
Is there a workaround?
On Feb 28, 2013, at 10:47 AM, Rudolph Pienaar wrote:
> After a conventional FS run you can do the following:
>
> $>mri_annotation2label --subject --hemi --lobesStrict
> .lobesSt
Thank you! Is there something similar to assign labels to functional cortices
eg. motor, visual, auditory?
Thanks
S
On Feb 28, 2013, at 10:47 AM, Rudolph Pienaar wrote:
> After a conventional FS run you can do the following:
>
> $>mri_annotation2label --subject --hemi --lobesStrict
> .lobesS
After a conventional FS run you can do the following:
$>mri_annotation2label --subject --hemi --lobesStrict
.lobesStrict.annot
Which will create an annotation file .lobesStrict.annot
containing the lobar labels. To extract these into their own individual
label files, do
$>mri_annotation2lab
Also, is there a way to associate these labels with motor/auditory/visual
cortices? Or do I have to use the specific parcellations?
On Feb 28, 2013, at 9:25 AM, "Sudhin A. Shah" wrote:
> Hello,
>
> Is there a lookup table I can use to convert free surfer labels to lobes?
> Either label nos
Hello,
Is there a lookup table I can use to convert free surfer labels to lobes?
Either label nos (1006, 2006 etc) or label names (ctx-rh-superiorfrontal)? I
have 86 labels and want an easy way to differentiate them into the
corresponding lobes.
Thanks,
S
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