Re: [Freesurfer] convert multiple Analyze to single 4D nifti

2008-10-24 Thread Xu Cui
Thanks, Doug and Kara, mri_concat is very handy. Xu On Fri, Oct 24, 2008 at 11:40 AM, Doug Greve <[EMAIL PROTECTED]>wrote: > one way to do it is with mri_concat, something like > > mri_concat f???.img --o f.nii.gz > > if your individual volumes are f000.img f001.img etc > > > Kara Dyckman wrote:

Re: [Freesurfer] convert multiple Analyze to single 4D nifti

2008-10-24 Thread Doug Greve
one way to do it is with mri_concat, something like mri_concat f???.img --o f.nii.gz if your individual volumes are f000.img f001.img etc Kara Dyckman wrote: I'm not sure. When I just tried it, it converted to .nii.gz. Maybe it has to do with the version of fsl being used? I'm posting this

Re: [Freesurfer] convert multiple Analyze to single 4D nifti

2008-10-24 Thread Kara Dyckman
I'm not sure. When I just tried it, it converted to .nii.gz. Maybe it has to do with the version of fsl being used? I'm posting this to the freesurfer listserv to see if anyone else has ideas. Xu Cui wrote: Thanks Kara. I tried fslmerge on my images and the result is a single .img / .hdr p

[Freesurfer] convert multiple Analyze to single 4D nifti

2008-10-23 Thread Xu Cui
Does anybody know how to convert a series of Analyze files into a single nii file? Each analyze file is a single 3D volume at a time point; the nii file would be 4d. Thanks, Xu -- Xu Cui Department of Psychiatry and Behavioral Sci