did you look at the file it points to as the source of the error?
/local/limachiagv/freesurfer/subjects/CON_201/stats/aseg.stats
On 07/27/2016 05:00 PM, Limachia, Gaurang (NIH/NINDS) [F] wrote:
> Hello All,
>
> My table.dat file loaded fine. However, I came across the following
> error when I wa
Hello All,
My table.dat file loaded fine. However, I came across the following error when
I was running the Qdec generate stats data table. If you can let me know what I
can do to fix the following error I would greatly appreciate it.
Uncaught exception: command failed: asegstats2table --common
thanks!
> Date: Tue, 4 Aug 2015 15:01:43 -0400
> From: gr...@nmr.mgh.harvard.edu
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] qdec - Generate stats data table
>
> You can just run recon-all with the -wmparc flag. It should be pretty
> quick, less than
rom start or is there a shortcut for getting this file?
> Thanks Doug.
> Pablo
>
> > Date: Tue, 4 Aug 2015 11:42:43 -0400
> > From: gr...@nmr.mgh.harvard.edu
> > To: freesurfer@nmr.mgh.harvard.edu
> > Subject: Re: [Freesurfer] qdec - Generate stats data table
> >
u
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] qdec - Generate stats data table
>
> Have you looked in /Volumes/NEW_VOLUME/GBS/117AS/stats/wmparc.stats to
> see if there might be a problem?
>
> On 08/04/2015 05:43 AM, pablo najt wrote:
> > Dear FS experts,
>
Have you looked in /Volumes/NEW_VOLUME/GBS/117AS/stats/wmparc.stats to
see if there might be a problem?
On 08/04/2015 05:43 AM, pablo najt wrote:
> Dear FS experts,
> I am trying to generate my stats data tables with QDEC -after
> successfully loading my data table- and come across the following
Dear FS experts,I am trying to generate my stats data tables with QDEC -after
successfully loading my data table- and come across the following error.Any
recommendations would be greatly appreciated.Thank you in advancePabloData
table loading completed successfully.
SUBJECTS_DIR is '/Volumes/NEW
Hello,
I was running the tutorial on Qdec, when I went to generate stats data, it
started running fine, and then I got the following error message:
aparcstats2table --hemi rh --parc aparc.a2005s --meas area --tablefile
/mnt/hgfs/VBM/freesurfer_EONCS/EONCS/buckner_data/tutorial_subjs/qdec/stats
Hi Rajeev,
Usually, this type of error is produced if stats file is missed, check if aseg.
stats file is there in directory "/usr/local/freesurfer/subjects/140/stats"
directory.
If this file is missed in some subjects, you can add "--skip" to command line
like;
asegstats2table --subjects 01 0
Hi all,
I am new to this, and wonder if you could help me set this up please.
OS: Ubuntu 10.10 ; 64 bit (a complete newbie with linux)
I am going through buckner - tutorial for the group analysis with Qdec.
I am at the step where I have to import the aseg and aparc data. I clicked
on the "genera
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