It worked! Thank you so much Bruce!
Tara
On Thu, Aug 7, 2014 at 1:59 PM, Bruce Fischl
wrote:
> you are missing one argument (the name of the label). It should be:
>
> mris_convert --label lh.cluster1.label NAME lh.white lh.cluster1.label.gii
>
>
>
> On Thu, 7 Aug 2014, Tara Miskovich wrote:
>
you are missing one argument (the name of the label). It should be:
mris_convert --label lh.cluster1.label NAME lh.white lh.cluster1.label.gii
On Thu, 7 Aug 2014,
Tara Miskovich wrote:
Thank you for the help Bruce. I really appreciate it! So if we have a custom
made label to we need to some
Thank you for the help Bruce. I really appreciate it! So if we have a
custom made label to we need to somehow add it to the
FreeSurferColorLUT.txt.
mris_convert --label lh.cluster1.label lh.white lh.cluster1.label.gii
The above is not working for me. I keep getting no errors or anything, just
the
p.s. oh, and lh.white is so that we have a surface. The label is just a
(small) set of points on the surface, and doesn't contain other
information needed to generate a surface (like connectivity)
On Thu, 7 Aug
2014, Tara Miskovich wrote:
Hi Doug thank you for the response. I just wasn't sure
Hi Tara
the second "V1" is for looking up the name of the label in
FreeSurferColorLUT.txt. If you were converting to an annotation for example
we would embed the proper colors into it.
cheers
Bruce
On Thu, 7 Aug 2014, Tara Miskovich wrote:
Hi Doug thank you for the response. I just wasn't s
Hi Doug thank you for the response. I just wasn't sure what was required
here. Specifically why we need to call on the white matter surface. And
what the second V1 would be for.
Thank you,
Tara
On Thu, Aug 7, 2014 at 11:05 AM, Tara Miskovich wrote:
> Hi all,
>
> I could really use some help wi
Does this not work for you?
cd $SUBJECTS_DIR/subject/label
mris_convert --label lh.V1.label V1 ../surf/lh.white lh.V1.label.gii
On 08/07/2014 12:05 PM, Tara Miskovich wrote:
> Hi all,
>
> I could really use some help with this
>
> I am trying to convert a group cluster to GIFTI (.gii) format.
Hi all,
I could really use some help with this
I am trying to convert a group cluster to GIFTI (.gii) format. I just need
some help running mris_convert.
The example for a label to GIFTI is
mris_convert --label lh.V1.label V1 lh.white lh.V1.label.gii
I'm trying to figure out what is required h
