you are missing one argument (the name of the label). It should be:
mris_convert --label lh.cluster1.label NAME lh.white lh.cluster1.label.gii
On Thu, 7 Aug 2014,
Tara Miskovich wrote:
Thank you for the help Bruce. I really appreciate it! So if we have a custom
made label to we need to somehow add it to the FreeSurferColorLUT.txt.
mris_convert --label lh.cluster1.label lh.white lh.cluster1.label.gii
The above is not working for me. I keep getting no errors or anything, just
the usage in the terminal.
Thanks again!
Tara
On Thu, Aug 7, 2014 at 12:51 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>
wrote:
p.s. oh, and lh.white is so that we have a surface. The label is
just a (small) set of points on the surface, and doesn't contain
other information needed to generate a surface (like
connectivity)
On Thu, 7 Aug 2014, Tara Miskovich wrote:
Hi Doug thank you for the response. I just wasn't sure
what was required
here. Specifically why we need to call on the white matter
surface. And what
the second V1 would be for.
Thank you,
Tara
[cleardot.gif]
On Thu, Aug 7, 2014 at 11:05 AM, Tara Miskovich
<misko...@uwm.edu> wrote:
Hi all,
I could really use some help with this
I am trying to convert a group cluster to GIFTI (.gii) format. I
just
need some help running mris_convert.
The example for a label to GIFTI is
mris_convert --label lh.V1.label V1 lh.white lh.V1.label.gii
I'm trying to figure out what is required here. I understand I
put in
the label after label and the output at the end, but in this
example I
am not sure what the V1 and lh.white are for.
Thanks,
Tara
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