External Email - Use Caution
Hi Freesurfer Developers,
I was hoping to get some advice on fixing pial surface error so we can
calculate cortical thickness. In several patients, although the aseg is
fine, the red outline for the pial surface is missing parts of the cortex
(not the
7;d really appreciate it. If I somehow failed to send the files
please let me know as well.
Thank you!
Monica
On Fri, Jan 31, 2020 at 11:37 AM Monica Bondy wrote:
> Thank you so much! I just sent the gzipped subject directory
> *subjectdir.gz. *
> My main concern is that a lot of the latera
ints in the WM in that area
>
> On 1/28/2020 7:56 PM, Monica Bondy wrote:
>
> External Email - Use Caution
> Sorry for the very late reply and not explaining the problem well in the
> first place. I would still appreciate your assistance if possible.
> Like some other threads
t includes the voxel coords of where you think
> things should be more accurate we will take a look
>
> cheers
> Bruce
> On Fri, 31 Jan 2020,
> Monica Bondy wrote:
>
> >
> > External Email - Use Caution
> >
> > Dear Freesurfer experts,
External Email - Use Caution
Dear Freesurfer experts,
I was wondering if I could get some help with a problem that I keep
experiencing. For some of the patients, their gray matter is not properly
included in the pial surface. I have tried tkmregister and using control
points but n
stead).
>
> On 12/13/2019 12:12 PM, Monica Bondy wrote:
>
> External Email - Use Caution
> Hello FreeSurfer experts,
>
> I am trying to figure out how to fix the segmentation so that the cortex
> is properly included.
> I have had this problem with several subjects
