Re: [Freesurfer] map .xls or .txt file to fsaverage

2009-09-30 Thread Kara Dyckman
Just FYI - 65536 is the max number of rows in excel, so it's probably not reading the whole file. Douglas N Greve wrote: > If you are combining data across subjects in your matlab program, aren't > they already in the same space? > > Bruce Fischl wrote: > >> use mri_surf2surf. And you should

Re: [Freesurfer] mri_surfcluster problem?

2009-01-09 Thread Kara Dyckman
Thanks Pratap, I'll try it again. Kara Pratap Kunwar wrote: Kara and Lauren, I think Doug has fixed this problem. i had similar problem but it is working now. pratap Hi Lauren (and Doug), I'm having the same issue. I ran montecarlo simulations on Friday and then tried to use the re

Re: [Freesurfer] mri_surfcluster problem?

2009-01-05 Thread Kara Dyckman
Hi Lauren (and Doug), I'm having the same issue. I ran montecarlo simulations on Friday and then tried to use the results in mri_surfcluster. It ran, but I also got the same CWP values (-0.1) for each cluster in the sum file. Also, when it runs, it gives a CEPHES ERROR. Here is what I get

Re: [Freesurfer] convert multiple Analyze to single 4D nifti

2008-10-24 Thread Kara Dyckman
img / .hdr pair, not a nii or nii.gz file. Do you have any clue? The reason to convert to nii is that fsfast seems to require nii file. Thanks, Xu On Thu, Oct 23, 2008 at 2:20 PM, Kara Dyckman <[EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]>> wrote: If I remember correctly, yo