Re: [Freesurfer] registration error (reCAPTCHA not checked)

2023-09-06 Thread lizhao...@sjtu.edu.cn
External Email - Use Caution Thanks for the quick reply. I have tried my mac mini (safari), windows workstation (chrome), windows server (edge), and ubuntu server (firefox) to get the license. Yet it all turned out with a captcha error. Best! Lizhao Du School of Biomedical

Re: [Freesurfer] registration error (reCAPTCHA not checked)

2023-09-06 Thread fsbuild
External Email - Use Caution  The captcha authentication will not work if javascript is blocked from running in your browser.  Check that you browser preferences are not set to block/filter javascript in its preferences and/or by using some added browser extension.  I’m not awar

[Freesurfer] freesurfer data analysis and visualization

2023-09-06 Thread Pukovisa Prawiroharjo
External Email - Use Caution anyone have suggestion data visualization from freesurfer volumetric. i need visualization of 2 volume before and after of the same individual patient and between 2 groups in a research. i've found some paper use pysurfer, anyone have other suggestions

Re: [Freesurfer] FreeSurfer hippo-amygala module

2023-09-06 Thread Iglesias Gonzalez, Juan E.
External Email - Use Caution Thanks for the interest in our work, Anton! We don’t have a template in MNI space, sorry (it’s on the to-do list, but buried among many other items). But you can always segment the template with the atlas 😃 Cheers, /Eugenio -- Juan Eugenio Iglesias h

[Freesurfer] keep T1w matrix size during recon-all (without zero-padding)

2023-09-06 Thread Rona Haker
External Email - Use Caution Hi, Can recon-all be performed without zero-padding the final matrix aparc+aseg in order to keep the original T1w matrix size? This will greatly help me in further analyses. Thank you! ___ Freesurfer mailing l

[Freesurfer] FreeSurfer hippo-amygala module

2023-09-06 Thread Dr. Anton Jakovcic
External Email - Use Caution Dear all, here is Anton - a PhD candidate from Max Planck Institute for Human Cognitive and Brain Research in Leipzig, Germany. Using FreeSurfer module segment_subregions, I successfully segmented amygdala for individual HCP subjects. Thanks a lot f

Re: [Freesurfer] converting preprocessed surface functional data to volume

2023-09-06 Thread wangzhiwei3233
External Email - Use Caution Dear Doug, Thank you for your replying. I collected the data by myself using a SIEMENS machine. Sorry, what do you mean by mapping the time course. I guess I am not trying to do that. I would like to do beta series analysis. I used the command in i

[Freesurfer] registration error (reCAPTCHA not checked)

2023-09-06 Thread lizhao...@sjtu.edu.cn
External Email - Use Caution Hi there, I am Oscar. Recently I am using FreeSurfer for fMRI data analysis. A license is required yet I could not get the license.txt from my e-mail. After filling the form from https://secure-web.cisco.com/174jctt4T-x9hrxRO4K0cJXM-oWXh3mvxRN7