External Email - Use Caution Thanks for the interest in our work, Anton! We don’t have a template in MNI space, sorry (it’s on the to-do list, but buried among many other items). But you can always segment the template with the atlas 😃 Cheers, /Eugenio
-- Juan Eugenio Iglesias http://secure-web.cisco.com/1g6gun1nsf1mJ716coy3hC0-u-AbQGpxPhF54AmyF1MXqwLGsXL6lOU88WkafhE45WQjr5dBsIqHgNNZLIeXnankF0J8iSvDybiJJcUgaL1RJqirBI9sopHaCw8Ikx9FExl1zvnifC08PA_PiIog5ne79NQQtTTCz0RzVJ8zQ04RI3KWmOVy7PQM5SnbatgBHz__sIJIvKp1A1_0V0rlv9E2UGBtGQTmsDVv1D6T1ATU1I4wHMoPGPOMOVYJIzU-XzAcf58Ei41kQpa3Uu_knYA/http%3A%2F%2Fwww.jeiglesias.com From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Dr. Anton Jakovcic <jakov...@cbs.mpg.de> Date: Wednesday, September 6, 2023 at 10:10 AM To: freesurfer <freesurfer@nmr.mgh.harvard.edu> Cc: Seyma Bayrak <bay...@cbs.mpg.de> Subject: [Freesurfer] FreeSurfer hippo-amygala module External Email - Use Caution Dear all, here is Anton - a PhD candidate from Max Planck Institute for Human Cognitive and Brain Research in Leipzig, Germany. Using FreeSurfer module segment_subregions, I successfully segmented amygdala for individual HCP subjects. Thanks a lot for developing it! Currently, I am trying to get a group-level or a MNI-level segmentation to build a representative figure. Do you think, is it possible to segment amygdala in MNI-registration template? Any help/suggestion is appreciated. Kind regards Anton Jakovcic _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/15IKvTflStKRntjxa_pEzE-1YbPTVajzeFFSGFUaS63YChriz8tAZ1yjlQylfCegrU5SE_Oehtt93JpsweNM2tYb0qkNncoxjoKtTmJmW6RTQusK_rtzpm6-LrALxhOP0Z6t3yl8g1WFY1gNHEnlsJIMXpNqMiL_rNV_PRlKc-DMY4cjdNmUR__M_HRf9N0t4JmloX0ltQP0Gem5n1cp1AE52FQz7qt3Aeu1SNeMTEaHbCcIDVvaLB7xXPh1Nz-YolSKm2_Nvf5tqcRGlB1GGdw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
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