Dear Doug,
I don't understand what you mean by " the variance of the fMRI time series".
I fed Freesurfer only structural MRI data. Does that mean that Freesurfer
automatically assumes the data to be longitudinal? I really hope not.
Sincerely,
Ye
On Tue, Apr 14, 2015 at 8:11 PM, Douglas Greve
w
I think the topology is constrained to be correct - are you sure there is an
error? And I guess I would try smoothing in freeview
Cheers
Bruce
> On Apr 19, 2015, at 8:29 PM, Jonathan DuBois
> wrote:
>
> Hi Bruce,
>
> Thanks. It took some trial and error but I was able to fix the surface wi
Hi Bruce,
Thanks. It took some trial and error but I was able to fix the surface with
the reposition surface tool. However, it results in a fairly jagged surface
with some topology error. To correct this, should I use the smooth surface
tool in freeview or reprocess the surfaces with recon-all? Th
Hi Doug,
Sorry I am not sure that I understand. Does the --y file contain all of
the values for each individuals subject, mapped to the fsaverage image?
Kind regards,
Bronwyn Overs
Research Assistant
Neuroscience Research Australia
Neuroscience Research Australia
Margarete Ainsworth Buildin
No, it gets the information from the stack of data used as the --y input
to mri_glmfit.
doug
On 4/19/15 7:05 PM, Bronwyn Overs wrote:
Hi all,
I am still a little confused as to how the individual values are
calculated for the significant clusters in the GLM model. Is the
cluster mapped backe
Hi all,
I am still a little confused as to how the individual values are
calculated for the significant clusters in the GLM model. Is the cluster
mapped backed on the individual brain and the mean thickness for that
region is printed out for each individual?
Kind regards,
Bronwyn Overs
Rese
