Dear Doug,

I don't understand what you mean by " the variance of the fMRI time series".
I fed Freesurfer only structural MRI data. Does that mean that Freesurfer
automatically assumes the data to be longitudinal? I really hope not.

Sincerely,
Ye


On Tue, Apr 14, 2015 at 8:11 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu>
wrote:

>  In theory, WLS is the optimal estimator in the case where variance
> differs across subject. The FS implementation actually computes
> "psuedo-WLS" in which the weights are just the inverse of the first level
> variance. A true WLS would use the random effect variance plus the lower
> level variance. The first  level variance is determined from the variance
> of the fMRI time series.
>
> doug
>
>
> On 4/13/15 6:42 PM, ye tian wrote:
>
> Hello Freesurfers,
>
>  I would like to be a little more specific about my question. Was
> heteroskedasticity a reason for Weighted Least Square (WLS)? If so, how did
> Freesurfer determine the weights?
>
>  Thank you!
>
>  Sincerely,
> Ye
>
>
>
>
> On Mon, Apr 13, 2015 at 4:59 PM, ye tian <tianye...@gmail.com> wrote:
>
>> Dear Freesurfers,
>>
>>  Can someone please explain to me why WLS was chosen as the method of
>> regression?
>>
>>  Thank you very much!
>>
>>  Sincerely,
>> Ye
>>
>
>
>
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