Re: [Freesurfer] sMRI using Freesurfer 5.1 followed by DTI using Freesufer 5.3

Say, following the set of commands given on the FsTutorial/Diffusion page (freesurfer.net/fswiki/FsTutorial/Diffusion) On Mon, 15 Sep 2014 05:26:01 -0700 Bruce Fischl wrote what kind of DTI analysis? On Sun, 14 Sep 2014, prasser wrote: > Hi, > > Co

[Freesurfer] Displaying labels in FreeView

Hello All, I am doing a study and I have determined some regionals volumes in the Aparc and Aseg files which are significant. I would like to show these in Freeview while hiding the other insignificant ones. Please advice if its possible in Freeview. Thank you Mohammed Goryawala, PhD University

Re: [Freesurfer] how to choose the best random effect in LME models

Hi Fabio If you want to compare a lme model including only a single random effect for the intercept term against the same model but including only a single random effect for the slope term all you need to do is to choose the one with higher maximum likelihood after model fitting. However if y

[Freesurfer] how to choose the best random effect in LME models

Dear Freesurfer Users, I am trying different LME models to describe the time evolution of cortical thickness in anorexia patients. The LME tools provide a function (lme_mass_LR) to test whether a model with q+1 random effects is better (fits the data better) than one with q random effects, eg w

Re: [Freesurfer] problems with tracula pre-processing (bvecs)

Dear all, What does this mean? That tracula is more robust when running it seperately for the tracts I am interested in? Thanks, Barbara On Mon, Sep 15, 2014 at 4:44 PM, Michele Cavallari < cavallari.mich...@gmail.com> wrote: > errata corrige: it did work! I had to re-run the whole thing includi