Re: [Freesurfer] Coregistration?

2005-10-11 Thread Graham Wideman
Nate: Is there a reason you don't want to coregister them with AFNI's coregistration? Regardless, AFNI also has a program to covert AFNI format to ANALYZE format data. Be aware however that AFNI supports all 48 possible data orders, while ANALYZE does not... so keep good track of the right-lef

Re: [Freesurfer] hardware recommendations?

2005-10-11 Thread Nick Schmansky
Lukas, The newer machines that we use here at the NMR center for Linux have roughly this configuration: http://www.verari.com/nemesys_1.asp That is: - dual 2.5GHz Opteron (AMD) processor - 8GB RAM - NVIDIA GeFORCE video card - 100GB hard disk These are not requirements but rather 'recommendat

Re: [Freesurfer] Coregistration?

2005-10-11 Thread Doug Greve
You can use spmregister (front end for spm) or fsl_rigid_register (uses fsl). Neither spm nor fsl will accept BRIKS, but I think the wrappers will as they will convert the input to analyze using mri_convert. If not, then you'll have to convert them youself. You should also use tkregister2 to c

Re: [Freesurfer] hardware recommendations?

2005-10-11 Thread L . Scheef
Hi Bruce, I would be happy if you could send me a sample configuration! Many thanks in advance, Lukas Am 10 Oct 2005 um 9:07 hat Bruce Fischl geschrieben: > Hi Lukas, > > we've been using CENT OS4, with opterons. We can send you a complete > recent sample configuration if you like. > > Bruc