Hi,
I intend to package python-skbio as a predependency of a Debian Med
package upgrade. I have prepared the packaging in SVN[1] but it does
not build but fails with a strange error, that I have never seen in
Python modules:
...
Copying scikit_bio.egg-info to
/home/andreas/debian-maintain/repac
t; but without being able to rproduce the problem on my end, cannot test the
> solution.
>
> -- jeet
>
>
>
> On 7/29/15 7:27 AM, Andreas Tille wrote:
> >Hi Jeet,
> >
> >On Wed, Jul 29, 2015 at 01:09:56AM -0400, Jeet Sukumaran wrote:
> >>Hi Andrea
Hi,
I'd like to package
svn://anonscm.debian.org/debian-med/trunk/packages/python-pyvcf/trunk/
for the Debian Med team but was running into
...
dh_auto_test -O--buildsystem=pybuild
I: pybuild base:170: python2.7 setup.py test.
running test
Searching for distribute
Reading https://pypi.pyt
Hi,
I'd like to package
svn://anonscm.debian.org/debian-med/trunk/packages/python-pyfasta/trunk/
for the Debian Med team. The package builds so far but I'm a bit
concerned about
dh_auto_test -O--buildsystem=pybuild
I: pybuild base:170: cd
/build/python-pyfasta-0.5.2/.pybuild/pythonX.Y_
Hi,
On Tue, Oct 13, 2015 at 11:42:57PM +0200, Piotr Ożarowski wrote:
> > Searching for distribute
> > Reading https://pypi.python.org/simple/distribute/
> > Download error on https://pypi.python.org/simple/distribute/: [Errno 111]
> > Connection refused -- Some packages may not be found!
> > Coul
Hi Brent,
I intend to package pyfasta for the Debian distribution. I tried to also
run the unit tests:
$ LC_ALL=C python setup.py nosetests
running nosetests
running egg_info
writing pyfasta.egg-info/PKG-INFO
writing top-level names to pyfasta.egg-info/top_level.txt
writing dependency_links to
Hi Python team,
I have no idea why this package now fails to build but was building
before.
Any hint would be welcome
Andreas.
- Forwarded message from "Chris West (Faux)"
-
Date: Mon, 19 Oct 2015 19:05:55 +0100
From: "Chris West (Faux)"
To: Debian Bug Tracking System
Subject:
Hi Konstantin,
the full story of the problem with tests can be read here:
https://bugs.debian.org/802354
I'll keep you updated if we find a solution but may be you might have
one yourself and can help solving the issue.
On Tue, Oct 20, 2015 at 07:37:57AM +0200, Olivier Sallou wrote:
> > The
Hi,
the problem discussed in bug #742691 (message 55)[1] seems to be back in
the latest version of python-biom-format. I intended to fix bug #802867
by the latest upstream version but was again running into
make[2]: Leaving directory '/build/python-biom-format-2.1.5+dfsg/doc'
DEB_BUILD_OPTIONS=
Hi,
I'd like to package something that has a source.py in the main directory
of the download tarball and a bunch of Python files ins src/.
There is no makefile of setup.py. Is there any suggested procedure how
to build a package from this?
Kind regards
Andreas.
--
http://fam-tille.de
Hi,
I'm working on packaging Gubbins for the Debian Med team. The build
currently ends up in
...
Making install in python
make[2]: Entering directory '/build/gubbins-1.4.3/python'
/usr/bin/python3 setup.py build
running build
running build_py
running build_scripts
make[3]: Entering directory '/b
at 01:04:31PM +0100, Andreas Tille wrote:
> Hi,
>
> I'm working on packaging Gubbins for the Debian Med team. The build
> currently ends up in
>
> ...
> Making install in python
> make[2]: Entering directory '/build/gubbins-1.4.3/python'
> /usr/bin/python
Hi Gard,
thanks for the pointer - I was not aware of this Python module.
On Tue, Dec 22, 2015 at 01:57:54PM +0100, Gard Spreemann wrote:
> The upstream package from which r-cran-fastcluster originates, simply
> called "fastcluster", provides both an R and a Python interface as
> first-class citiz
Hi,
I realised that for jellyfish[1] Python bindings can be activated. I
tried to do so and configuring and building works fine - but I have no
idea how to sensibly install the files into the python-jellyfish
package. Any idea how to call swig/python/setup.py or do something else
to install the
On Tue, Dec 29, 2015 at 02:07:05PM -0500, Paul Tagliamonte wrote:
> That won't solve the problem, since both will provide the python module
> jellyfish
I agree. BTW, I just became aware about the Python bindings of the DNA
Jellyfish by discussing with Diego. :-)
I'm not in a hurry with uploading
Hi Guillaume,
when Diego intended to package python-jellyfish a discussion about the
duplicate name came up. I even became aware that your jellyfish code
provides Python bindings and I intend to provide these as Debian package
as well. This would lead to a conflict to the completely unrelated
mu
Hi Guillaume,
On Thu, Dec 31, 2015 at 06:24:57PM -0500, Guillaume Marcais wrote:
> if I am attached to the name Jellyfish for the main software itself, the
> script bindings have seen little use (I believe) up to now. Renaming python
> module to dna_jellyfish, bio_jellyfish, or some other suggesti
Hi,
I'm forwarding this issue of the test suite to upstream and Debian
Python mailing list since I admit I have no idea what might be wrong
here.
Any help is welcome
Andreas.
- Forwarded message from Chris Lamb -
Date: Thu, 14 Jan 2016 18:04:32 +
From: Chris Lamb
To: sub...@
Hi Dmitry,
thanks for your response.
On Fri, Jan 15, 2016 at 11:20:08AM +0300, Dmitry Shachnev wrote:
> > [...]
> >
> > First differing element 1:
> > test1: regular expression regex('.*)') is malformed
> > [sre_constants.error: (unbalanced parenthesis at position 2)]
> > test1: regula
Hi Dmitry,
On Fri, Jan 15, 2016 at 12:56:50PM +0300, Dmitry Shachnev wrote:
>
> Now you are getting an error with Python 3.4 which doesn't have this change :)
This is what I suspected.
> How about something like this?
>
> self.assertEqual(e.args[0], 'Dummy Task')
> self.assertIn("test
Hi Python masters,
do you have any hint for this bug. I'd guess it is connected to Python
3.5 but I have no idea how to fix this.
Any help would be welcome
Andreas.
- Forwarded message from Chris Lamb -
Date: Sun, 10 Jan 2016 20:47:45 +
From: Chris Lamb
To: sub...@bugs.d
Hi,
I tried to get the dh_auto_test for python-biom-format[1] working but it
seems my way to copy the test data to the right place is not doing the
trick. There are always errors like
dh_auto_test
I: pybuild base:184: cd
/build/python-biom-format-2.1.5+dfsg/.pybuild/pythonX.Y_2.7/build; python2
Hi,
as you can read below, one test of the test suite fails. As far as I
can see it is possibly a rounding issue rather than a failure. I wonder
how the test could be tweaked to pass successfully if you share my
opinion or what else could be done to pass the test suite successfully.
Kind regar
Hi Diego,
On Tue, Mar 15, 2016 at 04:55:36PM +0100, Diego M. Rodriguez wrote:
> hope everything is going fine! I'm writing you in the hopes of pinging
> you about the status of the solving of the module naming conflict of
> the jellyfish packages (informally and hopefully politely!).
There is no
Hi,
On Tue, Mar 15, 2016 at 07:34:39PM +0100, Diego M. Rodriguez wrote:
> Hello Andreas,
>
> > This was not really intended but now it happened. We now need to
> > decide about the two options:
> >
> > 1. Cancel the upload to new and drop the python3-jellyfish package
> > 2. Just leave this
Hi Diego,
On Tue, Mar 15, 2016 at 07:34:39PM +0100, Diego M. Rodriguez wrote:
> > This was not really intended but now it happened. We now need to
> > decide about the two options:
> >
> > 1. Cancel the upload to new and drop the python3-jellyfish package
> > 2. Just leave this as is and fol
Package: wnpp
Severity: normal
Hi,
the package pythonqt was once a dependency of a Debian Med package but
this was removed. Now pythonqt has no rdepends any more and is hard to
maintain since it needs Qt4. May be its the best to remove the package
at all from Debian. If anybody (may be Debian
Hi,
On Sun, Jul 10, 2016 at 11:34:53AM +1000, Brian May wrote:
> Moved to debian-python list from bug report.
Great - so I can step in here with an equivalent problem. :-)
> Not sure I understand how dh-python / pybuild help with this problem.
>
> I thought the recommended way to deal with bui
Hi,
I need to package python-lefse[1] as a predependency for some Debian Med
package (metabit). There is no actuall build system just a set of *.py
files but pybuild says:
$ pybuild --detect
distutils
Is there any sensible way to use pybuild for this module (or is there a
simple
upload the current state in Git
or close the bug manually?
Kind regards
Andreas.
On Sun, Aug 07, 2016 at 12:43:06AM +0200, Andreas Tille wrote:
> Hi,
>
> I have commited some enhancements to python-simpy (fixed lintian errors
> and other stuff) but I can not reproduce the d
Hi,
I've got no help on the Debian Med packaging list. Is there any hint
how I could track down a test Python suite issue what exact command
was called and failed?
Thanks for any hint
Andreas.
On Tue, Aug 09, 2016 at 11:32:40PM +0200, Andreas Tille wrote:
> Hi,
>
> I t
Hi Scott,
On Sat, Aug 13, 2016 at 12:41:42PM -0400, Scott Kitterman wrote:
> > >
> > > Any more complete hint from a possibly bowtie2 user would be helpful
> > >
> > > Andreas.
> > >
> > > [1] svn://anonscm.debian.org/debian-med/trunk/packages/srst2/trunk/
>
> A link to a build log showin
On Sun, Aug 14, 2016 at 10:39:37AM +1000, Ben Finney wrote:
> > There is no such link.
>
> You could make one:
>
> * Build the package using Sbuild (you are doing this already to ensure
> the build works cleanly, right?)
I actually uses pbuilder / cowbuilder for this purpose.
> * Take the ou
On Mon, Aug 15, 2016 at 05:00:52AM +1000, Ben Finney wrote:
> > https://paste.debian.net/789238/
>
> That appears to be a simple failure when the test suite is run. The
> assertions, as reported, are in the ‘test_srst2’ module:
>
> =
> […]
> File "test_srst2.py", line 213, in test_run_bowti
On Tue, Aug 16, 2016 at 06:23:43AM +1000, Ben Finney wrote:
> Andreas Tille writes:
>
> > Yes, this is what I guessed from the log. However, how can I find out
> > why exactly the command is not called?
>
> That seems to be a question to take up with the upstream dev
Hi,
the former maintainer of pylibtiff inside Debian Med team Mathieu
Malaterre does not care for the package any more and thus I tried
my luck to salvage it. I have no personal interest in this package
nor does it have any rdepends. There is no direct connection to
the Debian Med topic but sinc
¡Hola Maxi!
On Sat, Oct 22, 2016 at 07:44:37AM +0200, Maximiliano Curia wrote:
> El 2016-10-21 a las 09:36 +0200, Andreas Tille escribió:
> >the former maintainer of pylibtiff inside Debian Med team Mathieu
> >Malaterre does not care for the package any more and thus I tried my luc
On Sat, Oct 22, 2016 at 02:49:48AM -0400, Scott Kitterman wrote:
>
> It still needs a human uploader. Unless someone's volunteering for that it
> should go to QA or be removed.
Yes, that's why I'm asking here.
Kind regards
Andreas.
--
http://fam-tille.de
Uploaded with the fixes below as Maintainer Debian QA Group
On Sat, Oct 22, 2016 at 07:44:37AM +0200, Maximiliano Curia wrote:
> ¡Hola Andreas!
>
> El 2016-10-21 a las 09:36 +0200, Andreas Tille escribió:
> >the former maintainer of pylibtiff inside Debian Med team Mathieu
&g
Hi Gard,
thanks for trying to track down the issue.
On Wed, Nov 09, 2016 at 03:26:04PM +0100, Gard Spreemann wrote:
> On Tuesday, 8 November 2016 18:38:22 CET Andreas Tille wrote:
> > Hi,
> >
> > I tried to upgrade r-cran-fastcluster[1] which also created Python
>
On Thu, Nov 17, 2016 at 12:10:03PM +0100, Gard Spreemann wrote:
> ...
> I think it would be a good idea for python-fastcluster to recommend
> python-scipy and python3-fastcluster to recommend python3-scipy.
Uploaded (unfortunately without the additional Recommends which I
learned to late since I j
Hi Christian,
On Wed, Nov 16, 2016 at 04:50:56PM +0100, chrysn wrote:
> On Wed, Nov 16, 2016 at 04:45:52PM +0100, Andreas Tille wrote:
> > Yes - if you tell me exactly what Git URL to clone and what branch is
> > the Debian branch to build.
>
> git clone git+ssh://git.debian
Hi,
python-fastcluster seems to have an issue in the test suite for armel[1]:
...
Method: average...OK.
Meok
test_nan (tests.fastcluster_test) ... FAIL
test_vector (tests.fastcluster_test) ... thod: weighted...OK.
...
Metric: mahalanobis...Method: single...OK.
Metric: user...Mok
Done, thanks for your preparation, Andreas.
On Thu, Dec 01, 2016 at 05:38:56PM +0100, chrysn wrote:
> Hello Andreas,
>
> (tl;dr: all fixed, please build and upload).
>
> On Thu, Nov 17, 2016 at 04:45:51PM +0100, Andreas Tille wrote:
> > While I have fixed the clean targ
Hi Yaroslav,
I just want to make some noise amongst Python experts about bug #846228.
I admit I have no idea - but since there was no response for 10 days now
several packages git a testing removal notice.
I think python-joblib has several rdepends and thus it would IMHO be
better maintained in D
Hi Yaroslav,
On Wed, Dec 07, 2016 at 08:23:45AM -0500, Yaroslav Halchenko wrote:
> As for this particular issue -- I think I have complained upstream and
> it was addressed: https://github.com/joblib/joblib/issues/428 I will now
> see to build/upload current upstream snapshot -- codebase seems la
On Sat, Dec 10, 2016 at 12:09:55AM +0100, Bernd Zeimetz wrote:
> > I think python-joblib has several rdepends and thus it would IMHO be
> > better maintained in DPMT than in a private Github repository. What
> > do you think?
>
> On the other side, DPMT is nothing to drop packages one does not wa
Hi,
I noticed that openmolar has a new upstream version which I injected
into packaging Git[1]. Upstream moved to Python 3 and so tried I for
the packaging.
Unfortunately I have severe trouble to stop the build system from always
trying pyversions instead of py3versions. For instance I injected
On Sun, Dec 18, 2016 at 05:03:10PM +0100, Alberto Caso wrote:
> On Sat, 2016-12-17 at 21:14 +0100, Andreas Tille wrote:
> > Unfortunately I have severe trouble to stop the build system from
> > always trying pyversions instead of py3versions. For instance
Hi Dmitry,
On Sun, Jan 08, 2017 at 09:45:23PM +0300, Dmitry Shachnev wrote:
> >
> > The build does fail in the tests phase, but I does not look related to
> > what you are experiencing. Instead it seems to need running setup.py
> > makeuis in the build process.
>
> I get the same result as Albert
Hi,
lots of watch files are reported as failing since (at least yesterday).
Is something wrong with http://pypi.debian.net/ ?
Kind regards
Andreas.
--
http://fam-tille.de
Hi Ben,
I just uploaded python-lockfile 0.12.2-2~bpo8+1 to backports since I
need it to backport python-schema-salad.
I would have loved to commit the changes to some team Git repository but
you are using a repository outside git.debian.org. I'd consider it
sensible if you would consider maintai
Hi Ben,
On Fri, Mar 03, 2017 at 09:50:59PM +1100, Ben Finney wrote:
>
> Fortunately, Git is a distributed VCS; we can share changes between
> repositories with all information preserved.
>
> If you also publish your repository, you can ‘git request-pull’ to the
> package maintainer address and I
Hi Ben,
On Wed, Mar 08, 2017 at 03:13:09AM +1100, Ben Finney wrote:
> Andreas Tille writes:
>
> > However, if maintainers decide from deriving what several people
> > consider good practice of team maintenance and put extra work on me
> > (like creating an extra pu
Hi Ben,
On Thu, Mar 09, 2017 at 11:41:44PM +1100, Ben Finney wrote:
> > You decided to use github instead of git.debian.org.
>
> Is your complaint that the Debian packaging for ‘python-lockfile’ is on
> GitHub? This is the first time it's been raised in this thread.
May be I messed up with Githu
Hi,
I tried to upgrade the Jessie backport of python-pyvcf from
0.6.7-1~bpo8+1 to 0.6.8-1. Unfortunately when trying to build this
minor update the build runs into lots of errors like:
...
creating build/temp.linux-amd64-2.7
creating build/temp.linux-amd64-2.7/vcf
x86_64-linux-gnu-gcc -pthread -
Hi,
On Wed, Sep 06, 2017 at 05:26:13PM +0200, Yuri D'Elia wrote:
> On Wed, Sep 06 2017, Andreas Tille wrote:
> > I opened an issue on Github
> >
> > https://github.com/statsmodels/statsmodels/issues/3909
> >
> > requesting Python3 support.
>
> I co
Hi Yuri,
On Wed, Sep 06, 2017 at 10:35:57PM +0200, Yuri D'Elia wrote:
> I always built from source, not with the debian packaging.
>
> >https://anonscm.debian.org/git/debian-science/packages/statsmodels.git
> >
> > but the build failed (for other reasons). I'd willing to work on this
> > but
Hi Diane,
On Wed, Sep 06, 2017 at 02:45:14PM -0700, Diane Trout wrote:
>
> > but the build failed (for other reasons). I'd willing to work on
> > this
> > but I definitely need help since I'm lacking the needed Python
> > knowledge.
>
> Hi,
>
> I saw your debian-python3 branch for statsmodels.
Hi Diane,
On Wed, Sep 06, 2017 at 09:35:58PM -0700, Diane Trout wrote:
> > >
> > > libpython2.7-stdlib : Breaks: python-pandas-lib (<= 0.20.3-1) but
> > > 0.20.3-1 is to be installed
> >
> > I also get an error in the Python 2.7 test suite so I have no idea
> > where to continue with the Python
Hi,
in a Github issue[1] upstream told suggested to move from nosetest
to pytest for python-pysam[2] package. Any hint how to approach
this?
Kind regards
Andreas.
[1] https://github.com/pysam-developers/pysam/issues/541
[2] https://anonscm.debian.org/git/debian-med/python-pysam.git
--
On Mon, Sep 18, 2017 at 11:18:43PM +0200, Mattia Rizzolo wrote:
> On Mon, Sep 18, 2017 at 10:54:40PM +0200, Andreas Tille wrote:
> > in a Github issue[1] upstream told suggested to move from nosetest
> > to pytest for python-pysam[2] package. Any hint how to approach
> > this
Hi,
On Mon, Sep 18, 2017 at 05:48:48PM +1000, Stuart Prescott wrote:
> On Sunday, 17 September 2017 22:14:18 AEST Diane Trout wrote:
> > I just did it that way because it was the least disruptive change I
> > could make that would let me build and test the package.
>
> Sure, that's entirely sensi
Hi Yaroslav,
On Thu, Sep 21, 2017 at 10:24:53PM -0400, Yaroslav Halchenko wrote:
> On Thu, 21 Sep 2017, Diane Trout wrote:
>
> > On Thu, 2017-09-21 at 17:56 -0400, Yaroslav Halchenko wrote:
> > > If you could allow to review would be great.
> > > Thanks for all the work.
> > > I was btw also tryi
Hi Yaroslav,
On Sat, Sep 23, 2017 at 10:00:35AM -0400, Yaroslav Halchenko wrote:
>
> > I would prefer to move pandas to Debian Science or Debian Python. I
> > fail to see the specific use in NeuroDebian field.
>
> I ould repeat that I don't mind having it moved under -science or
> -python teams
On Sun, Sep 24, 2017 at 11:24:10AM -0700, Diane Trout wrote:
> Status with statsmodels almost done
>
> Trying to deal with jquery.
>
> leaving command
>
> -rm ./build/html/_static/jquery.js
>
> causes a build failure now.
Without checking the source: I'm usually doing something like
ov
Hi Diane,
On Sun, Sep 24, 2017 at 11:45:43PM -0700, Diane Trout wrote:
> The remaining issues are:
>
> * Some of the doc pages call get_rdataset, and there's no network
> access in the builder so those calls fail. (ugliest error)
Can you pre-fetch the data and provide it in debian/datasets?
> *
Hi Diane,
On Mon, Sep 25, 2017 at 10:38:00AM -0700, Diane Trout wrote:
>
> I'm planning on ignoring it for now.
Sounds sensible. Thanks a lot for your work on this
Andreas.
--
http://fam-tille.de
On Mon, Sep 25, 2017 at 09:36:43PM -0700, Diane Trout wrote:
> > > * Some of the doc pages call get_rdataset, and there's no network
> > > access in the builder so those calls fail. (ugliest error)
> >
> > Can you pre-fetch the data and provide it in debian/datasets?
>
> I made the changes and ca
Hi Diane,
On Tue, Sep 26, 2017 at 11:36:17AM -0700, Diane Trout wrote:
> > BTW, I'd love if you would merge your work to master branch. I'm a
> > bit
> > confused by the amount of branches and lost track which one to look
> > at.
>
> I verified which was which and deleted the obsolete branch.
>
Dear Diane,
On Tue, Sep 26, 2017 at 02:49:12PM -0700, Diane Trout wrote:
>
> > While I have not tried to build the current status I wonder what you
> > think about #873512. I'm perfectly fine with your solution to
> > exclude
> > some tests - I just wanted to give a hint that there is a potentia
Dear Diane,
On Tue, Sep 26, 2017 at 10:47:21PM -0700, Diane Trout wrote:
>
> > Since it is accepted for the R packages and the data are refering
> > to R data I do not see any reason why this should not be accepted.
>
> I traced back from Rdatasets to the original R packages.
>
> Every one of t
Dear Diane,
On Wed, Sep 27, 2017 at 12:20:13AM -0700, Diane Trout wrote:
> >
> > I think there is no "right" place to do it - but ftpmaster is used
> > to read README.source in these cases. So why not using it?
> >
>
> I added the readme to README.source with a bit of explanatory text.
>
> al
Hi again,
On Wed, Sep 27, 2017 at 10:05:15AM +0200, Andreas Tille wrote:
> > I added the readme to README.source with a bit of explanatory text.
> >
> > all changes are pushed.
>
> Seems the updated README.source escaped your push. ;-)
I think I've restored it f
: statsmodels/statsmodels
Cc: Andreas Tille , Author
Subject: Re: [statsmodels/statsmodels] RuntimeError: Kernel died before
replying to kernel_info (#4116)
This is a ipython/jupyter issue, and not related to statsmodels. You can ask at
their issue tracker.
--
You are receiving this because
Hi,
On Thu, Nov 09, 2017 at 08:48:02PM +0100, Gordon Ball wrote:
>
> I just built statsmodels 0.8.0-6 in and amd64 sbuild chroot without
> encountering this issue.
>
> Looking at the trace in #880245, it looks like the key error is
>
> zmq.error.ZMQError: Address already in use
>
> and the
Hi,
I'm trying to upgrade python-csb to the new upstream version (in
Git[1]). If I try to build it I get:
gbp:info: Building with (cowbuilder) for sid
gbp:info: Tarballs 'python-csb_1.2.5+dfsg.orig.tar.gz' not found at
'../tarballs/'
gbp:info: Creating
/home/andreas/debian-maintain/alioth/deb
control: tags -1 help
Hi,
I've upgraded snakemake in Git to latest upstream but its featuring the
same issue. I'm pretty sure you Python people know a simple answer for
this issue.
Any help would be welcome
Andreas.
On Sat, Oct 14, 2017 at 05:33:22AM +0300, Adrian Bunk wrote:
> Source:
control: tags -1 help
Hi,
On Sun, Dec 10, 2017 at 09:05:07PM +0200, Adrian Bunk wrote:
> === warnings summary
> ===
> None
> [pytest] section in setup.cfg files is deprecated, use [tool:pytest]
> instead.
I've fixed this in Git[1]
> -
Hi,
On Mon, Dec 11, 2017 at 10:48:51AM +0100, chrysn wrote:
>
> Please review the package and sponsor it for upload (or team upload it).
Uploaded to new.
Thanks for your work on this,
Andreas.
--
http://fam-tille.de
Hi again,
On Mon, Dec 11, 2017 at 09:27:57AM +0100, Andreas Tille wrote:
>
> On Sun, Dec 10, 2017 at 09:05:07PM +0200, Adrian Bunk wrote:
> > === warnings summary
> > ===
> > None
> > [pytest] section in
Hi,
as I reported yesterday, I've tested python-pysam 0.13.0+ds-1 as in Git
yesterday with the new samtools 1.6 package. (For those who need a
prove here is the fill build[1].) Unfortunately if I build today the
package does not build any more. The python2 tests are running fine but
if it comes
On Fri, Dec 15, 2017 at 05:22:09PM +0200, Juhani Numminen wrote:
>
> In debian/rules, are the arguments to dh_auto_test still needed? The error
> went
> away when I removed said arguments, like so:
>
> override_dh_auto_test:
> xvfb-run --auto-servernum --server-args="-screen 0 1024x768x24"
Hi,
the Debian Science team needs to update python-pandas sooner or later
and the new version of pandas needs python-moto. I had a look into this
and realised it needs python-aws-xray-sdk[1]. I've created a local Git
packaging repository which I would like to push to salsa.debian.org since
I'm s
Hi again,
is it correct to assume that Debian Python Modules Team do not want to
see this precondition for a scientific oriented package in its scope and
I should move it to Debian Science?
Kind regards
Andreas.
On Fri, Jan 12, 2018 at 05:01:53PM +0100, Andreas Tille wrote:
>
Hi Yaroslav,
On Mon, Jan 15, 2018 at 05:26:28AM -0500, Yaroslav Halchenko wrote:
> I don't mind helping to maintain it under any of those teams. Thank you
> Andreas for taking care about this new dependency. I will look into updating
> pandas package
That's very welcome and help is actually nee
Hi Simon & Tristan (racing condition with same answer),
On Mon, Jan 15, 2018 at 12:21:02PM +, Simon McVittie wrote:
> On Mon, 15 Jan 2018 at 12:59:29 +0100, Andreas Tille wrote:
> > E File
> > "/build/python-aws-xray-sdk-0.95/.pybuild/pythonX.Y_2.7/build/tests/tes
Hi Piotr,
On Mon, Jan 15, 2018 at 01:52:27PM +0100, Piotr Ożarowski wrote:
> async (and all aio* libs in other tests) is not available in Python 2.7
> so simply disable them. You can do this in debian/rules:
>
> export PYBUILD_TEST_ARGS_python2=--ignore tests/test_async_local_storage.py
> --igno
Hi,
when continuing to check preconditions for python-moto my next target
is python-jsondiff[1]. When trying to build I get:
...
I: pybuild base:184: cd
/build/python-jsondiff-1.1.1/.pybuild/pythonX.Y_3.6/build; python3.6 -m
unittest discover -v
tests (unittest.loader._FailedTest) ... ERROR
Hi Tristan,
On Wed, Jan 17, 2018 at 06:56:00AM +, Tristan Seligmann wrote:
> I found this package, which seems to match, from the same organization:
> https://github.com/ZoomerAnalytics/nose-random
>
> Unfortunately it seems to be unreleased, so I think you would need to
> package a GitHub sn
Hi,
I kept on working packaging python-moto predependencies. I'm now
stumbling upon python-backports.tempfile[1] and
python-backports.weakref[2]. My naive packaging attempt puts
the modules into
/usr/lib/python*/dist-packages/backports
leaving the same package
/usr/lib/python3/dist-pack
Hi,
as you might have noticed I finalised the preconditions to build
python-moto which is in salsa.d.o[1]. When trying to build I get:
dh_auto_test -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py test
running test
running egg_info
writing requirements to moto.egg-info/requi
Hi Lumin,
On Tue, Feb 06, 2018 at 03:27:22PM +, Lumin wrote:
> I checked the packaging,
Thanks a lot!
> and my debuild ended up with an
> error different from
>
>> AttributeError: 'module' object has no attribute 'backport_assert_raises'
>
> According to a quick investigation on this p
Hi Lumin,
On Tue, Feb 06, 2018 at 03:27:22PM +, Lumin wrote:
> With patch [1] dpkg-buildpackage can go a bit further while building
> this package.
> See requirements-dev.txt. And new problems arose:
I've added python-flask to Build-Depends and can reproduce this issue:
> 1. $ make test #
Hi,
the Debian Med team is working on python-bd2k[1] which builds fine
and also runs build time tests. Unfortunately when trying to install
python3-bd2k it fails with:
...
File "/usr/lib/python3/dist-packages/bd2k/util/exceptions.py", line 38
raise exc_type, exc_value, traceback
Hi Piotr,
On Wed, Feb 07, 2018 at 10:29:37AM +0100, Piotr Ożarowski wrote:
>
> > And how about merging the modules and apps teams into one?
>
> If not separated at team level, I definitely want to have them somehow
> separated at repository level so that it's clear which package is which
> type
Hi Ożarowski,
On Mon, Feb 12, 2018 at 10:09:42AM +0100, Piotr Ożarowski wrote:
> > If you ask me at least cython should go to Python Modules team. Its
> > not really just a random Python application and strongly connected
> > to several Python modules.
>
> Cython is a library. I don't care what
On Mon, Feb 12, 2018 at 10:02:12PM +0100, Ondrej Novy wrote:
> if ! grep-dctrl -q -F Vcs-Git 'salsa.debian.org' debian/control ; then
???
Could you please post your complete script which is probably using
GitLab API just to let others profit from an example doing mass-changes?
Thank you
A
Hi Andrew,
I do not know whether Python Apps team does any automatic migration of
packages in SVN. Since I'm interested in gpxviewer (not as maintainer
but as user) I'd volunteer to do the SVN to Git migration. From my
perspective the Debian GIS team which also maintains several OSM related
pack
Sorry for the noise - I realised that this is just done
https://salsa.debian.org/python-team/applications/gpxviewer
On Thu, Mar 01, 2018 at 11:36:48AM +0100, Andreas Tille wrote:
> Hi Andrew,
>
> I do not know whether Python Apps team does any automatic migration of
> packages in
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