Re: [MoM] Introduction

f > Code), and now have the opportunity to dedicate time to Debian > packaging. Thank you for the introduction. Also thanks for joining the video conference yesterday - I wished more contributors would sneak in to these short meetings since its nice to have some face to face interaction. >

[MoM] Introduction

Hello all, I'm Anne Ghisla, working at Forschungzentrum Jülich as generalist / support tech, with close ties to NeuroDebian. I use Debian daily at work, used to be active in geospatial FOSS (OSGeo, Google Summer of Code), and now have the opportunity to dedicate time to Debian packaging. I wish t

Re: Self Introduction

Please do not reply to me personally, rather reply on the list. See below :- On Fri, Apr 01, 2022 at 01:14:09AM +0530, Vinay wrote: >> Cool. But I do not see this package in the archive. >> Am I misunderstanding something? > The package isn't uploaded to the archive yet. Okay, do you need sponso

Re: Self Introduction

On 01/04/22 00:41, Vinay wrote: On 31/03/22 01:32, Nilesh Patra wrote: On Thu, Mar 31, 2022 at 12:43:57AM +0530, Vinay wrote: I am Vinay from India, a student currently pursuing Computer Science Engineering. Hello and welcome. I am from India as well so it is nice to see you on this list.

Re: Self Introduction

On 31/03/22 01:32, Nilesh Patra wrote: On Thu, Mar 31, 2022 at 12:43:57AM +0530, Vinay wrote: I am Vinay from India, a student currently pursuing Computer Science Engineering. Hello and welcome. I am from India as well so it is nice to see you on this list. I use GNU/Linux and have been usi

Re: Self Introduction

Hi, Am Thu, Mar 31, 2022 at 01:32:31AM +0530 schrieb Nilesh Patra: > On Thu, Mar 31, 2022 at 12:43:57AM +0530, Vinay wrote: > > I am Vinay from India, a student currently pursuing Computer Science > > Engineering. > > Hello and welcome. I am from India as well so it is nice to > see you on this l

Re: Self Introduction

On Thu, Mar 31, 2022 at 12:43:57AM +0530, Vinay wrote: > I am Vinay from India, a student currently pursuing Computer Science > Engineering. Hello and welcome. I am from India as well so it is nice to see you on this list. > I use GNU/Linux and have been using Debian for 2 years. > I have basic p

Self Introduction

Hello I am Vinay from India, a student currently pursuing Computer Science Engineering. I use GNU/Linux and have been using Debian for 2 years. I have basic packaging skills, recently I started my journey in packaging a node module (https://www.npmjs.com/package/prosemirror-view). Furthermore,

Re: Introduction

Hi Enric, thank you for reaching out! I just want to follow up on one aspect: even without any coding/packaging, everyone can contribute to the big long lasting positive effect for Debian and "Open" science/software/health/... by promoting open practices, software and licenses to apply and lega

Re: Introduction

Hi Enric, Am Sat, Oct 02, 2021 at 08:41:16PM +0200 schrieb Enric Garcia Torrents: > I am Enric, new to the project. I am a medical anthropologist with very > limited coding experience. My current research involves designing and > developing an open source decision making support system, specifical

Introduction

Hello! I am Enric, new to the project. I am a medical anthropologist with very limited coding experience. My current research involves designing and developing an open source decision making support system, specifically for those cases regarded as severe by the current main psychiatric under

Re: Introduction

Hi Shruti, Shruti Sridhar, on 2021-04-11 12:42:32 +0530: > My name is Shruti Sridhar and I’m currently a senior at BITS Pilani Goa, > India studying Biological Sciences and Chemical Engineering. I am reaching > out in regards to the Debian Med project in this year’s Google Summer of > Code for Qua

Introduction

Hello! My name is Shruti Sridhar and I’m currently a senior at BITS Pilani Goa, India studying Biological Sciences and Chemical Engineering. I am reaching out in regards to the Debian Med project in this year’s Google Summer of Code for Quality Assurance and Continuous Integration for Bioinformati

Re: Outreachy project: Provide introduction to microbiome analyses with Debian - inviting wet-lab researchers to Debian

Dear Tássia, On Thu, Mar 11, 2021 at 07:49:16AM -0800, Tassia Camoes Araujo wrote: > On 2021-03-07 18:47, Tassia Camoes Araujo wrote: > > > > Please help shaping this proposal so it ***really*** makes sense and > > attract interns ;-) > > > Thanks to Steffen and Tony, the project is now on Outre

Outreachy project: Provide introduction to microbiome analyses with Debian - inviting wet-lab researchers to Debian

Hi, On 2021-03-07 18:47, Tassia Camoes Araujo wrote: > > Please help shaping this proposal so it ***really*** makes sense and > attract interns ;-) > Thanks to Steffen and Tony, the project is now on Outreachy's website waiting for approval from Debian coordinators. Cheers, Tassia.

Re: "Introduction" tab on spreadsheet

re on the >> packaging. But I like it. And I keep having constructive 15 minutes >> repeatedly that I use as a break to add/verify/update say bcbio links, >> find packages not listed on our task pages, etc. >> >> No idea what this is evolving to. But I like it. > Loo

Re: "Introduction" tab on spreadsheet

structive 15 minutes > repeatedly that I use as a break to add/verify/update say bcbio links, > find packages not listed on our task pages, etc. > > No idea what this is evolving to. But I like it. Looks amazing! The introduction says "For write permissions to this spreadsheet pleas

"Introduction" tab on spreadsheet

https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit#gid=1120557851 I likely should spend less time on that nasty sheet and more on the packaging. But I like it. And I keep having constructive 15 minutes repeatedly that I use as a break to add/verify/update say

Re: [MoM] packaging gjh_asl_json (Was: Short Introduction)

Hi Andreas, On 9/8/20 11:56 AM, Andreas Tille wrote: Hi Andrei, Not a problem at all. Thanks for answering. sorry for the long delay which should remain untypical in a MoM project. My weekend was occupied by real life and yesterday was a busy day. On Fri, Sep 04, 2020 at 02:40:29PM +0200, An

Re: [MoM] packaging gjh_asl_json (Was: Short Introduction)

Hi Andrei, sorry for the long delay which should remain untypical in a MoM project. My weekend was occupied by real life and yesterday was a busy day. On Fri, Sep 04, 2020 at 02:40:29PM +0200, Andrei Rozanski wrote: > > I'll leave it to your preference since I don't mind much. I guess it > > mak

Re: [MoM] packaging gjh_asl_json (Was: Short Introduction)

Hi Andreas, On 9/4/20 1:12 PM, Andreas Tille wrote: Hi Andrei On Fri, Sep 04, 2020 at 11:50:44AM +0200, Andrei Rozanski wrote: Thanks for the feedback. I see the point. Also with multiple selection was not that big the effort ;) Sure. :-) I am happy to change the links if you provide one

Re: [MoM] packaging gjh_asl_json (Was: Short Introduction)

Hi Andrei On Fri, Sep 04, 2020 at 11:50:44AM +0200, Andrei Rozanski wrote: > Thanks for the feedback. I see the point. Also with multiple selection was > not that big the effort ;) Sure. :-) > I am happy to change the links if you provide one or I can get rid of them. I'll leave it to your pre

Re: [MoM] packaging gjh_asl_json (Was: Short Introduction)

Hi Andreas, Thanks for the feedback. I see the point. Also with multiple selection was not that big the effort ;) I am happy to change the links if you provide one or I can get rid of them. On 9/4/20 11:41 AM, Andreas Tille wrote: On Thu, Sep 03, 2020 at 08:10:45PM +0200, Andrei Rozanski w

[MoM] packaging gjh_asl_json (Was: Short Introduction)

On Thu, Sep 03, 2020 at 08:10:45PM +0200, Andrei Rozanski wrote: > Thanks! It worked. Good. I've seen you've spent a lot of time just to link my name to wiki.d.o page. While that's nice of you it would really not have been worth that effort. Its definitely not the best representation of my work

Re: Short Introduction

Hi Andreas, On 9/3/20 4:07 PM, Andreas Tille wrote: Hi Andrei, On Thu, Sep 03, 2020 at 02:49:41PM +0200, Andrei Rozanski wrote: I have done only a few changes. Is it possible to give me permissions to push the changes? ``` remote: You are not allowed to write to this project's wiki. fatal

Re: Short Introduction

Hi Andrei, On Thu, Sep 03, 2020 at 02:49:41PM +0200, Andrei Rozanski wrote: > > I have done only a few changes. Is it possible to give me permissions to > push the changes? > > > ``` > > remote: You are not allowed to write to this project's wiki. > > fatal: unable to access > 'https://salsa.

Re: Short Introduction

Hi Andreas, On 9/3/20 8:18 AM, Andreas Tille wrote: Hi Andrei, On Wed, Sep 02, 2020 at 05:53:06PM +0200, Andrei Rozanski wrote: Thanks for the help. You are welcome. I will check it. Thanks. Also, if needed, I could try to help migrating other pages. Ok, thanks. I do not think that

Re: Short Introduction

Hi Andrei, On Wed, Sep 02, 2020 at 05:53:06PM +0200, Andrei Rozanski wrote: > Thanks for the help. You are welcome. > I will check it. Thanks. > Also, if needed, I could try to help migrating other pages. I do not think that anything will become structurally better if pages will be migrated.

Re: Short Introduction

Hi Andreas, Thanks for the help. On September 2, 2020 17:11:36 Andreas Tille wrote: Hi Andrei, On Tue, Sep 01, 2020 at 09:49:42PM +0200, Andrei Rozanski wrote: I am not bored about wikis but maybe I will accept your help since when trying to create wiki account I get: ``` Account creatio

Re: Short Introduction

Hi Andrei, On Tue, Sep 01, 2020 at 09:49:42PM +0200, Andrei Rozanski wrote: > I am not bored about wikis but maybe I will accept your help since when > trying to create wiki account I get: > > > ``` > > Account creation failed: Automatic account creation disabled to stop > spammers signing up.

Re: Short Introduction

Hi Andreas, I am not bored about wikis but maybe I will accept your help since when trying to create wiki account I get: ``` Account creation failed: Automatic account creation disabled to stop spammers signing up. Please contact w...@debian.org and describe what you want to do in the wiki

Re: Short Introduction

Hi Andreas, Ok. Will do. On 9/1/20 9:13 PM, Andreas Tille wrote: Hi Andrei, you wrote in private mail that you are not sure what package to choose. But MoM is always about open questions and answers. ;-) So I try to clarify here. On Tue, Sep 01, 2020 at 09:24:47AM +0200, Andrei Rozanski wr

Re: Short Introduction

Hi Andrei, you wrote in private mail that you are not sure what package to choose. But MoM is always about open questions and answers. ;-) So I try to clarify here. On Tue, Sep 01, 2020 at 09:24:47AM +0200, Andrei Rozanski wrote: > > Regarding machine learning we are in the process of packaging

Re: Short Introduction

Hi Andreas, Thanks for the welcome! On 8/31/20 11:08 PM, Andreas Tille wrote: Hi Andrei, thanks a lot for your interest in Debian Med (again - since I also said so in private mail). On Mon, Aug 31, 2020 at 09:15:43PM +0200, Andrei Rozanski wrote: I am new to the project and I would like to

Re: Short Introduction

Hi Andrei, thanks a lot for your interest in Debian Med (again - since I also said so in private mail). On Mon, Aug 31, 2020 at 09:15:43PM +0200, Andrei Rozanski wrote: > I am new to the project and I would like to introduce myself. > > My name is Andrei Rozanski, currently I am a researcher in

Short Introduction

Hello all, I am new to the project and I would like to introduce myself. My name is Andrei Rozanski, currently I am a researcher in computational biology/bioinformatics at MPI-BPC. I work with genomes and species comparison. Also, a little bit of machine learning and data analysis. On progr

Re: Introduction: Jun Aruga

On Mon, Mar 23, 2020 at 8:22 PM Jun Aruga wrote: > > > > I will be attending again, yes! I haven't decided on a particular > proposal yet. Do you have any particular ideas? > > > > I'm currently waiting for getting the money back for my flight to > > FOSSASIA in Singapore. I intended to go there

Re: Introduction: Jun Aruga

> > > I will be attending again, yes! I haven't decided on a particular > > > proposal yet. Do you have any particular ideas? > > I'm currently waiting for getting the money back for my flight to > FOSSASIA in Singapore. I intended to go there and by doing so consuming > my "Debian vacation" for

Re: Introduction: Jun Aruga

Hi Jun, thank you for showing up here. On Mon, Mar 16, 2020 at 04:13:06PM +0100, Jun Aruga wrote: > > It was really nice to finally meet you and it was great to have you at the > > Sprint! > > Hi Michael, it's great to meet you again. +1 > > That's me and another well known Debian contributo

Re: Introduction: Jun Aruga

> Hey Jun! > > It was really nice to finally meet you and it was great to have you at the > Sprint! Hi Michael, it's great to meet you again. > That's me and another well known Debian contributor in the video :-D > https://www.youtube.com/watch?v=RNIInb72-z0 Yeah, I watched the video. I found

Re: Introduction: Jun Aruga

On Sun, Mar 15, 2020 at 5:28 PM Jun Aruga wrote: > Hello Debian Med team, > > My name is Jun Aruga. I am a passionate hobbyist for the > bioinformatics. Especially genome sequencing area. > > I had an opportunity to join Debian Med Sprint event last month in Berlin. > it was very fun, and inspire

Introduction: Jun Aruga

Hello Debian Med team, My name is Jun Aruga. I am a passionate hobbyist for the bioinformatics. Especially genome sequencing area. I had an opportunity to join Debian Med Sprint event last month in Berlin. it was very fun, and inspired me. https://wiki.debian.org/Sprints/2020/Debian%20Med%20Sprin

Re: Introduction post- OUTREACHY APPLICANT

Hi Anandi, On Mon, Mar 09, 2020 at 08:22:26PM +0530, Anandi Puritipati wrote: > My name is Anandi and I'm an applicant of the Outreachy May 2020 Internship > round! I am a masters graduate in the field of Biological Engineering from > the Indian Institute of Technology, Madras and I am really inte

Introduction post- OUTREACHY APPLICANT

Hi! My name is Anandi and I'm an applicant of the Outreachy May 2020 Internship round! I am a masters graduate in the field of Biological Engineering from the Indian Institute of Technology, Madras and I am really interested in contributing to Debian as part of my initial application! I'm fairly w

Re: w1bw introduction

Hello, On 23.02.19 21:05, Andreas Tille wrote: Hi Bruce, On Sat, Feb 23, 2019 at 10:04:18AM -0500, Bruce Walker wrote: Debin-Med team, I wanted to introduce myself with the intent of helping out. I was a DD back in the 2000s (retired emeritus), and I'm interested in becoming active again. I'

Re: w1bw introduction

Hi Bruce, On Sat, Feb 23, 2019 at 10:04:18AM -0500, Bruce Walker wrote: > Debin-Med team, > > I wanted to introduce myself with the intent of helping out. > > I was a DD back in the 2000s (retired emeritus), and I'm interested in > becoming active again. I've also done quite a bit of scientific

w1bw introduction

Debin-Med team, I wanted to introduce myself with the intent of helping out. I was a DD back in the 2000s (retired emeritus), and I'm interested in becoming active again. I've also done quite a bit of scientific computing in general and computational biology in particular, especially genome assem

Re: introduction and outreachy

Hi Joannis, On 18.10.18 03:36, Ioannis Valasakis wrote: I am Ioannis and I want to be part of Outreachy this year :) I am completing my MSc in Bionformatics so I find this is a very suitable place for me. I also love Debian and using it since mny years, so I am very excited to submit a pro

Re: introduction and outreachy

Hi Ioannis, On Thu, Oct 18, 2018 at 02:36:04AM +0100, Ioannis Valasakis wrote: > Hi all! I am Ioannis and I want to be part of Outreachy this year :) I am > completing my MSc in Bionformatics so I find this is a very suitable place > for me. I also love Debian and using it since mny years, s

introduction and outreachy

Hi all! I am Ioannis and I want to be part of Outreachy this year :) I am completing my MSc in Bionformatics so I find this is a very suitable place for me. I also love Debian and using it since mny years, so I am very excited to submit a proposal! Regards Ioannis

Re: Introduction

Hola Mentor, I applied for outreachy yesterday and i got a mail stating my initial application is rejected , so is there a way still to be in outreachy ? like being a co-mentor or something ?? On Wed, Oct 3, 2018 at 3:12 AM Andreas Tille wrote: > Hi Manas, > > On Tue, Oct 02, 2018 at 10:17:30PM

Re: Introduction

Hi Manas, On Tue, Oct 02, 2018 at 10:17:30PM +0530, Manas Kashyap wrote: > Hahaha no nothing like that. I am just a beginner and looking forward to > learn things. OK. That's a very sensible way to learn. > Well the thing is if can anyone connect me to riot channel or Irc channel i > can msg th

Re: Introduction

Hahaha no nothing like that. I am just a beginner and looking forward to learn things. Well the thing is if can anyone connect me to riot channel or Irc channel i can msg their my problems i am facing for adding autopkgtest for med team repos On Tue 2 Oct, 2018, 6:42 PM Andreas Tille, wrote: > H

Re: Introduction

Hi Manas, On Tue, Oct 02, 2018 at 01:02:43PM +0530, Manas Kashyap wrote: > Hola Guys , > I am Manas Kashyap currently an undergrad from India . > I have been in packaging for past 1 year and have packaged many node , ruby > and go modules and maintained modules of python , go , ruby , node , fonts

Introduction

Hola Guys , I am Manas Kashyap currently an undergrad from India . I have been in packaging for past 1 year and have packaged many node , ruby and go modules and maintained modules of python , go , ruby , node , fonts too . I have also worked with many open source projects like hamaralinux.org , wo

Re: Introduction

Hi Redmar, thanks for you interest in Debian Med. On Sun, May 14, 2017 at 01:56:30PM +0200, Redmar wrote: > My name is Redmar, and I work as a bioinformatician in food safety. I > would like to contribute to Debian Med by packaging applications. This > is something I already do for my job, and I

Introduction

Hi everybody, My name is Redmar, and I work as a bioinformatician in food safety. I would like to contribute to Debian Med by packaging applications. This is something I already do for my job, and I would like to improve my packages and share them with the community.  I have looked at https://www

Re: Introduction

Hi David, On Fri, Jun 21, 2013 at 03:28:45PM +0200, David Parsons wrote: > Hi again, > > I've just commited the changes, pdebuild looks OK, although it does > complain about some hooks not being found. I'm not sure what hooks you might mean - my pbuilder run was perfectly fine. I fixed a lintia

Re: Introduction

Hi again, I've just commited the changes, pdebuild looks OK, although it does complain about some hooks not being found. I'll be away for two weeks so don't take it personally if I don't answer ;-) David Le 21/06/2013 11:41, Andreas Tille a écrit : Hi David, On Fri, Jun 21, 2013 at 10:3

Re: Introduction

Hi David, On Fri, Jun 21, 2013 at 10:37:50AM +0200, David Parsons wrote: > > I won't be of a great help for splitting the set of biological > packages since I'm not a biologist either. > I had a question regarding the metapackages (MP for short) however. > Can a MP be included in another MP ? If

Re: Introduction

Hi Andreas, Le 18/06/2013 10:38, Andreas Tille a écrit : Hi David, On Mon, Jun 17, 2013 at 11:59:26PM +0200, Andreas Tille wrote: I suppose I've misunderstood something. Am I not supposed to "add the package to the “task”file where it fits the best" ? Don't worry - I can easily add it. You

Re: Introduction

Hi David, On Mon, Jun 17, 2013 at 11:59:26PM +0200, Andreas Tille wrote: > > I suppose I've misunderstood something. Am I not supposed to "add > > the package to the “task”file where it fits the best" ? > > Don't worry - I can easily add it. You are no member of the Blends team > which is no rea

Re: Introduction

Hi David, On Mon, Jun 17, 2013 at 04:20:54PM +0200, David Parsons wrote: > Hi Andreas and list, > > I've just svn-injected the kissplice package into the SVN repo. I've noticed the commit - thanks for your work on this. > I also tried to update the bio-ngs task file from > svn.debian.org/svn/bl

Re: Introduction

nal biology. My main interests are about Evolution and its dynamics but I'm also involved in sequence analysis and image analysis projects. Thanks for the introduction. For now, I have just finished (or so it looks) to package kissplice, an RNA-seq data analysis tool (more info on http://kis

Re: Introduction

re about Evolution and its dynamics but I'm also > involved in sequence analysis and image analysis projects. Thanks for the introduction. > For now, I have just finished (or so it looks) to package kissplice, > an RNA-seq data analysis tool (more info on > http://kissplice.prabi.fr

Introduction

Hi all, I am new to the debian-med poject and was hinted to introduce myself here. I'm a french engineer/researcher in bioinformatics and computational biology. My main interests are about Evolution and its dynamics but I'm also involved in sequence analysis and image analysis projects. For

Introduction.

Hello, Steffen Möller suggested I introduce myself. I'm a software developer / system administrator working in the Wold Lab at the California Institute of Technology. The lab's focus is on genome scale transcription regulation. My current main job duties are dealing with tracking and submittin

Re: Introduction

Hi Florent, On Fri, Dec 30, 2011 at 09:24:19PM +1000, Florent Angly wrote: > I maintain a few Perl modules on CPAN > (http://search.cpan.org/~fangly/ > ) and have recently uploaded my > first deb package, Math::Random::MT::Perl, at > http://mentors.debian.net/pac

Introduction

Dear DebianMed list, I just joined the group. I am a computational biologist, a microbial ecologist specifically, who uses mostly Perl when coding. I have been using Debian-based Linux distros for quite some time (Linux Mint Debian Edition at the moment) and became interested in packaging soft

Removed plain uncompiled c++ code from ensembl binary (Was: new member introduction)

On Fri, Dec 09, 2011 at 01:00:48PM +, Nick James wrote: > >I'm tempted to kick all files matching "*.h" and "*.cpp" from the binary > >package where these are pretty useless. This would solve the lintian > >warnings > > > >W: libensembl-core-perl: executable-not-elf-or-script > >usr/share/ens

Re: new member introduction

On Fri, Dec 09, 2011 at 04:58:46PM +, Nick James wrote: > Hi Andreas, > > Thanks for the instructions. One question, should I be checking out > the source with write permission: > > *svn co* |svn+ssh://u...@svn.debian.org/svn/debian-med/trunk/... > in which case do I need a username / passw

Re: new member introduction

On Fri, Dec 09, 2011 at 04:56:11PM +0100, Steffen Möller wrote: > On 12/09/2011 02:02 PM, Andreas Tille wrote: > > On Fri, Dec 09, 2011 at 11:55:41AM +, Nick James wrote: > >> I'm happy to look into other things that you are not sure if they > >> are needed. > A major reason for Ensembl to rema

Re: new member introduction

Hi Andreas, Thanks for the instructions. One question, should I be checking out the source with write permission: *svn co* |svn+ssh://u...@svn.debian.org/svn/debian-med/trunk/... in which case do I need a username / password? And commit changes myself. Or just for reading: |*svn co* |svn:/

Re: new member introduction

is sitting but *not* into the debian/ dir) 3. make -f debian/rules get-orig-source will create the source tarball I'm working on I created a Wiki page http://wiki.debian.org/DebianMed/Ensembl with this info. Anyone truly doing it please correct any issues the instructions or t

Re: new member introduction

here the debian/ >directory is sitting but *not* into the debian/ dir) > 3. make -f debian/rules get-orig-source >will create the source tarball I'm working on I created a Wiki page http://wiki.debian.org/DebianMed/Ensembl with this info. Anyone truly doing it please c

Re: new member introduction

On Fri, Dec 09, 2011 at 01:00:48PM +, Nick James wrote: > >W: libensembl-core-perl: executable-not-elf-or-script > >usr/share/ensembl/ensembl/misc-scripts/alternative_splicing/AltSplicingToolkit/src/util/StringUtil.h > >W: libensembl-core-perl: executable-not-elf-or-script > >usr/share/ensemb

Re: new member introduction

On Fri, Dec 09, 2011 at 11:55:41AM +, Nick James wrote: > I'm happy to look into other things that you are not sure if they > are needed. How do I get a list of scripts that are causing > problems? The idea is to run lintian on the resulting packages. So how to get these packages. There are

Re: new member introduction

Hi Andreas, On 08/12/11 21:56, Andreas Tille wrote: Hi again, On Thu, Dec 08, 2011 at 10:02:13PM +0100, Andreas Tille wrote: Hi Nick, On Thu, Dec 08, 2011 at 05:24:51PM +, Nick James wrote: It is what the Ensembl team use internally for batch submission. Iven in this case the script loo

Re: new member introduction

On 08/12/11 21:02, Andreas Tille wrote: Hi Nick, On Thu, Dec 08, 2011 at 05:24:51PM +, Nick James wrote: You probably know this, but bsub is the submission command for the LSF computer cluster submission software. Well, please do not overestimate my knowledge. I did not worked with cluste

Re: new member introduction

Hi again, On Thu, Dec 08, 2011 at 10:02:13PM +0100, Andreas Tille wrote: > Hi Nick, > > On Thu, Dec 08, 2011 at 05:24:51PM +, Nick James wrote: > > It is what the Ensembl > > team use internally for batch submission. > > Iven in this case the script looks somehow suspicious. s/I/E/ Nick, i

Re: Ensembl with Debian Re: new member introduction

On Thu, Dec 08, 2011 at 07:43:25PM +0100, Steffen Möller wrote: > We should decide over time what it means for us to see "Ensembl run". > The current definition for our package seems to be "use the public data > of Ensembl but have a local user management". This makes some very > decent sense for a

Re: new member introduction

Hi Nick, On Thu, Dec 08, 2011 at 05:24:51PM +, Nick James wrote: > You probably know this, but bsub is the submission command for the > LSF computer cluster submission software. Well, please do not overestimate my knowledge. I did not worked with clusters so far. > It is what the Ensembl >

Ensembl with Debian Re: new member introduction

Hello, On 12/08/2011 06:24 PM, Nick James wrote: > My suggestion is that we just ignore this script as it is not needed > for Ensembl to run. We should decide over time what it means for us to see "Ensembl run". The current definition for our package seems to be "use the public data of Ensembl but

Re: new member introduction

the docs I just recommended - feel free to ask any question here. Kind regards and thanks for the introduction Andreas. -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Arc

Re: new member introduction

is. I hope you feel comfortable with all the docs I just recommended - feel free to ask any question here. Kind regards and thanks for the introduction Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscrib

new member introduction

Hi, Just a quick post to introduce myself. I work for Eagle Genomics, an outsourced bioinformatics services and software company specialising in genome content management and the provision of open-source solutions. At Eagle we are intestered in packaging Ensembl, which is widely used genome

Re: New member introduction

On Thu, 26 Jun 2008, Olivier Langella wrote: I am new to debian-med and I would like to introduce myself : Bioinformatics engineer in the "UMR de Génétique Végétale" (http://moulon.inra.fr/welcomegb.html) and Linux user since the Debian Potato release, I would be happy to contribute to this gr

New member introduction

Hello, I am new to debian-med and I would like to introduce myself : Bioinformatics engineer in the "UMR de Génétique Végétale" (http://moulon.inra.fr/welcomegb.html) and Linux user since the Debian Potato release, I would be happy to contribute to this great project (depending on my skills).

New member introduction

Greetings, I'd like to introduce myself as a new member of Debian-Med. I'm a Research Programmer working in Molecular Graphics Laboratory of the The Scripps Research Institute. I'm a lead developer for Python Molecular Viewer which is distributed with MGLTools (http://mgltools.scripps.edu). Thank

GSoC Student Introduction

Hi I'm Ignacio Vergara, a prospective GSoC student. My proposal is about a biological database manager. Any suggestion is welcomed. Ignacio