Hi,
On 2025-02-22 13:40, Santiago Vila wrote:
Please note that the autopkgtests for the fixed version
https://tracker.debian.org/pkg/pytorch-geometric
do not pass.
[ Not sure if this deserves a new bug, or reopening this one,
as the way it fails is very similar ].
These are because python3-
Dear Maintainer,
On Tue, 14 May 2024 23:49:11 +0300 Adrian Bunk wrote:
Running Sphinx v7.2.6
loading intersphinx inventory from
https://ovito.org/docs/current/python/objects.inv...
loading intersphinx inventory from
https://docs.scipy.org/doc/scipy/objects.inv...
Warning, treated as error:
f
Hello,
The upstream has said they are not considering fixing this a priority,
thus unless someone from Debian side is willing to work on a patch,
prody will not make it to trixie.
Andrius
Hi,
On 2025-02-06 23:39, Lucas Nussbaum wrote:
Digging a bit further,
Thanks for investigating this issue.
1/ I confirmed that it has nothing to do with ruby (pybuild-autopkgtest
fails the same way with no ruby packages installed)
Good.
2/ It seems that the bottom line is: spglib built a
Hi David,
On Sun, 19 Jan 2025 10:19:54 +0100 David =?iso-8859-1?Q?Pr=E9vot?=
wrote:
This package hasn’t seen an upstream activity for more than twelve
years, and has no dependencies (besides php-text-captcha, but the same
can probably be said about it) in Debian. Given how PHP has changed in
t
Hi David,
Sorry for not replying faster.
On 2025-01-21 00:12, David Prévot wrote:
On 20/01/2025 08:25, Andrius Merkys wrote:
On 2025-01-19 12:16, David Prévot wrote:
This package hasn’t seen any upstream activity for a few years, and has
no dependencies (besides php-text-captcha, but the
Hi,
On 2025-01-31 15:54, Lucas Kanashiro wrote:
spglib autopkgtest is failing on 32 bits architectures due to some
issues with the python test suite:
https://ci.debian.net/packages/s/spglib/testing/armel/57276728
https://ci.debian.net/packages/s/spglib/testing/armhf/57232534/
https://ci.debian
On 2025-01-30 12:30, Andrey Rakhmatullin wrote:
Can be seen on https://ci.debian.net/packages/g/gemmi/testing/amd64/57218911/
but also fails during package build.
FAILED tests/test_hkl.py::TestMtz::test_f_phi_grid - AssertionError: False
is...
FAILED tests/test_hkl.py::TestSfMmcif::test_reading
On 2025-01-30 13:37, Bas Couwenberg wrote:
Dear Maintainer,
Your package FTBFS during the numpy2 transition:
https://buildd.debian.org/status/fetch.php?pkg=rdkit&arch=amd64&ver=202409.4-1%2Bb1&stamp=1738065005&raw=0
It is interesting to see the following error in the build logs:
A module
Hi,
On Fri, 24 Jan 2025 15:30:50 +1300 Vladimir Petko
wrote:
The patch updated groupId from 'dk.brics.automaton' to 'dk.brics'.
This means that reverse-dependencies need to be updated.
This is a separate issue in src:android-platform-tools-base.
src:automaton was broken and fixed in 1.12-4+
Hello,
On 2025-01-17 20:54, Santiago Vila wrote:
[36m[1m=== short test summary info
[0m
[31mFAILED[0m
test/data/test_feature_store.py::[1mtest_feature_store[0m -
RuntimeError: Boolean value of Tensor with more than one value is
ambiguous
Hi David,
On 2025-01-19 12:16, David Prévot wrote:
This package hasn’t seen any upstream activity for a few years, and has
no dependencies (besides php-text-captcha, but the same can probably be
said about it) in Debian. Given how PHP has changed in the mean time, I
doubt it’s even still working
Hi,
On 2025-01-16 09:45, Michael Banck wrote:
I opened an upstream issue yesterday evening and somebody mentioned
interest in looking at it, so maybe let's wait a day or two whether they
get a fix/PR, but yeah, otherwise we should drop big-endian at least
temporarily.
Thanks for forwarding the
Control: found -1 202409.4-1
Hi Michael,
On 2025-01-15 19:44, Michael Banck wrote:
I did not have a problem building it, so I uploaded 202409.4-1, let's
see how that one goes on the autobuilders.
Thanks a lot for uploading 202409.4-1. Interestingly, the problem with
'convert' does not resurf
Hello,
On 2025-01-15 09:54, Andrius Merkys wrote:
From a quick glance it seems that a lot of problems are related to
Python pickle reading. Upstream has made some fixes related to
endianness in version 202409.4 [1], thus packaging the newer upstream
version might mitigate the problem.
[1
Source: rdkit
Version: 202409.2-3
Severity: serious
Tags: ftbfs
Hello,
rdkit FTBFS in sid on s390x and ppc64. This manifests in the failure of
many tests:
The following tests FAILED:
8 - testDataStructs (Subprocess aborted)
9 - testFPB (Subprocess aborted)
10 - te
Control: tag -1 pending
Hello,
Bug #1083076 in rdkit reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:
https://salsa.debian.org/debichem-team/rdkit/-/commit/e8a99524ffc5416293e85f3f22aac0
Hi Michael,
On 2025-01-11 22:01, Michael Banck wrote:
On Mon, Dec 23, 2024 at 01:27:35PM +0200, Andrius Merkys wrote:
Since the freeze is drawing near, and rdkit is blocking a lot of packages, I
would suggest considering shipping rdkit without 32bit support in trixie.
This would cause all its
Control: tags -1 + confirmed
Hello,
On 2024-12-28 18:37, Lucas Nussbaum wrote:
The following tests FAILED:
5 - RandomTest (Failed)
I can confirm this test fails. I tried building with
DEB_BUILD_OPTIONS=noopt, but got the same result, so this is unrelated
to optimization.
The cod
Hi,
On Thu, 28 Nov 2024 18:40:07 +0100 Michael Banck wrote:
On Thu, Nov 28, 2024 at 09:40:01AM +0200, Andrius Merkys wrote:
> The same issue persists on armel too. I think we should add autopkgtest to
> possibly identify other architectures having this issue.
Looks like to be a general
Hello,
On 2024-12-07 15:56, Graham Inggs wrote:
219s from .pinkindexer import PinkIndexer
219s
/usr/lib/python3/dist-packages/dials/algorithms/indexing/lattice_search/pinkindexer.py:5:
in
219s import gemmi
219s E ModuleNotFoundError: No module named 'gemmi'
dials autopkgtest apparently does
Control: tags -1 + confirmed
Control: owner -1 !
Hello,
On 2024-12-02 18:48, Santiago Vila wrote:
Package: src:smiles-scripts
Version: 0.2.0+dfsg1-6
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build
This happens due to
control: retitle -1 python3-rdkit: SEGFAULT on import on armhf and armel
Hello,
The same issue persists on armel too. I think we should add autopkgtest
to possibly identify other architectures having this issue.
Andrius
control: found -1 202409.2-2
Hello,
The issue with segmentation fault on armhf persists in rdkit/202409.2-2
as well.
Andrius
Hi,
On Tue, 15 Oct 2024 11:39:58 +0200 "Salvo \"LtWorf\" Tomaselli"
wrote:
Dear Maintainer,
unfortunately pymongo changed API
This python code no longer works
from mongomock import gridfs
gridfs.enable_gridfs_integration()
I am not familiar with the package. There seems to be a new upstrea
Control: tags -1 + confirmed
On 10/30/24 13:15, Santiago Vila wrote:
[INFO] ---
[INFO] T E S T S
[INFO] ---
E: Build killed with signal TERM after 60 minutes of inactivity
---
Hello,
I am one of the upstream developers of cod-tools. Thanks a lot everyone
for tracking down the issue and coming up with a patch.
On 2024-09-29 22:52, Santiago Vila wrote:
El 29/9/24 a las 20:21, Aurelien Jarno escribió:
1) Defining the rule with an absolute path:
I would have gone wi
Hi,
On 2024-09-25 18:30, gregor herrmann wrote:
I noticed that cod-tools 3.10.0+dfsg-1.1 fails to build but only on
riscv64:
https://buildd.debian.org/status/package.php?p=cod-tools
https://buildd.debian.org/status/logs.php?pkg=cod-tools
I care about this issue because 1) I uploaded the -1.1 N
control: severity -1 important
Hello,
I have added -Wno-incompatible-pointer-types to CFLAGS for now, avoiding
FTBFS in order to let all reverse dependencies migrate before the
freeze. The upstream is informed about the issue,
-Wno-incompatible-pointer-types should be removed as soon as prope
control: forwarded -1 c...@dl.ac.uk
Hello,
I re-forwarded the issue to ccp4@ and got reply that the upstream has
recorded the bug in their internal issue tracker.
Andrius
Hi,
An upload of -8 has failed somewhy, I will retry ASAP.
Andrius
Control: severity -1 normal
Control: retitle -1 RM: mbdyn -- RoM; rc-buggy
Control: reassign -1 ftp.debian.org
Control: affects -1 + src:mbdyn
Hello,
On 2024-08-30 07:32, Helmut Grohne wrote:
I suggest removing mbdyn from Debian for the following reasons:
* It accumulated one RC-bug:
+ #9
Hi Yue,
On 2024-08-25 08:24, Yue Gui wrote:
Dear epics-base Maintainer,
The package epics-base build failed on arch riscv64.The crucial buildd
log below:
[snip]
My solution to this issue:
Add riscv64 support for this package. I have completed the development
of the patch for supporting the
Control: tag -1 pending
Hello,
Bug #1073390 in python-docxcompose reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:
https://salsa.debian.org/python-team/packages/python-docxcompose/-/comm
Hello,
It seems that the global offset table gets exceeded for mips64el even
with -mxgot. As the trixie freeze is drawing near I would suggest RMing
juce binaries (and their reverse dependencies) for mips64el for the time
being.
Andrius
control: forwarded -1 ccp4-...@dl.ac.uk
Hello,
The actual log excerpt reporting build failure is the following:
fortran/cmtzlib_f.c: In function 'lrhist_':
fortran/cmtzlib_f.c:279:43: error: passing argument 2 of 'ccp4_lrhist'
from incompatible pointer type [-Wincompatible-pointer-types]
27
control: tags -1 + unreproducible
control: severity -1 normal
On 2024-06-30 18:53, Michael Banck wrote:
Hi,
On Sat, Jun 29, 2024 at 10:21:02PM +0300, Adrian Bunk wrote:
On Mon, Jun 17, 2024 at 04:58:46PM +0300, Andrius Merkys wrote:
Source: openbabel
Version: 3.1.1+dfsg-9
Severity: serious
control: forwarded -1 openstructure-us...@maillist.unibas.ch
On 2024-06-16 16:08, Lucas Nussbaum wrote:
==
ERROR: testSpearmanCorrel (__main__.TestTable.testSpearmanCorrel)
---
Source: openbabel
Version: 3.1.1+dfsg-9
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
Hi,
openbabel FTBFS both in unstable (if a fix for #1073327 is applied) and
testing with the following:
99% tests passed, 2 tests failed out of 229
Total Test time (real) = 317.34 sec
The f
Hello,
On 2024-06-16 15:48, Lucas Nussbaum wrote:
/<>/src/formats/xml/xml.cpp:245:39: error:
invalid conversion from ‘const xmlError*’ {aka ‘const _xmlError*’} to
‘xmlError*’ {aka ‘_xmlError*’} [-fpermissive]
245 | xmlError* perr = xmlGetLastError();
|
Control: severity -1 important
On Fri, 26 Apr 2024 09:25:06 +0300 Andrius Merkys wrote:
Since I need to upload rdkit to experimental to deal with time_t64
transition, I am going to disable latexpdf documentation building for
the time being and deal with this issue later.
I have disabled
/home/merkys/pytorch-2.1.2+dfsg/build/aten/src
-I/home/merkys/pytorch-2.1.2+dfsg/aten/src
-I/home/merkys/pytorch-2.1.2+dfsg/build
-I/home/merkys/pytorch-2.1.2+dfsg
-I/home/merkys/pytorch-2.1.2+dfsg/cmake/../third_party/benchmark/include
-I/usr/lib/llvm-16/include -I/home/merkys/pytorch-2.1.2
Control: severity -1 important
Control: retitle -1 cpptraj: FTBFS on \!amd64
On Wed, 10 May 2023 02:29:08 +0530 Kiran S Kunjumon
wrote:
You package cpptraj has an autopkgtest, great.
However, it fails everywhere except on amd64. Can you please investigate the
situation and fix it?
I have ex
On Wed, 10 May 2023 02:29:08 +0530 Kiran S Kunjumon
wrote:
=== FAILURES
===
TEST: /tmp/autopkgtest-lxc.kz5vbtvg/downtmp/build.qgE/src/test/Test_SPAM
CPPTRAJ: SPAM Test
../MasterTest.sh: line 495: 3218 Killed $c
Hi,
On Wed, 24 Apr 2024 23:57:17 +0200 Chris Hofstaedtler
wrote:> An upload with t64 binaries is required as soon as possible. Given
the packages have to go to binary-NEW, you must upload with
binaries, and then probably follow up with a source-only upload once
they are ACCEPTed.
t64 binarie
Control: severity -1 important
Control: tags -1 - ftbfs
Hi,
On 2024-04-25 19:12, Santiago Vila wrote:
I noticed that chemicaltagger currently FTBFS and I believe it is because
of this problem, so to avoid duplicate reports, I'm raising this one to
serious.
A build log for chemicaltagger is a
Hi,
On 2024-04-25 19:12, Santiago Vila wrote:
I noticed that chemicaltagger currently FTBFS and I believe it is because
of this problem, so to avoid duplicate reports, I'm raising this one to
serious.
A build log for chemicaltagger is available here:
https://tests.reproducible-builds.org/deb
Source: rdkit
Version: 202309.3-3
Severity: serious
Tags: ftbfs sid
Hello,
rdkit FTBFS with the following error in latexpdf documentation build:
Extension error:
convert exited with error:
[stderr]
b'convert: Unable to read font
(/usr/share/fonts/type1/gsfonts/n019003l.pfb).\n'
[stdout]
b''
m
Hi Chris,
On 2024-04-25 00:57, Chris Hofstaedtler wrote:
t64 is already in unstable and making its way to testing. So you are
a bit late with getting rdkit fixed for t64.
An upload with t64 binaries is required as soon as possible. Given
the packages have to go to binary-NEW, you must upload wi
Hi,
On Mon, 05 Feb 2024 07:52:37 + Steve Langasek wrote:
If you have any concerns about this patch, please reach out ASAP. Although
this package will be uploaded to experimental immediately, there will be a
period of several days before we begin uploads to unstable; so if information
becom
Hi,
On Mon, 19 Feb 2024 21:35:16 + Steve Langasek
wrote:> Since turning on 64-bit time_t is being handled centrally
through a change
to the default dpkg-buildflags (https://bugs.debian.org/1037136), it is
important that libraries affected by this ABI change all be uploaded close
together
control: unblock 1068942 by 1069098
Hello,
emboss no longer builds on s390x and its binaries have been RMed from
s390x, unblocking emboss migration to testing. This in principle should
resolve the current bug.
Andrius
Source: tomogui
Version: 0.3.1-2
Severity: serious
Tags: ftbfs
Hello,
tomogui FTBFS in sid on amd64:
running build_doc
Traceback (most recent call last):
File "/home/merkys/tomogui-0.3.1/setup.py", line 804, in
setup_package()
File "/home/merkys/tomogui-0.3.1/setup.py
-protection -O2 -Werror=implicit-function-declaration
-ffile-prefix-map=/home/merkys/freesas-0.9.0=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security
-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -DNDEBUG
"-DPyMODINIT_FUNC=__attribute__((visib
Source: nabu
Version: 2023.1.1-3
Severity: serious
Tags: ftbfs
Hello,
nabu FTBFS in sid on amd64:
FAILURES
=
control: retitle -1 opensearch: FTBFS with lucene9/9.10.0+dfsg
I have recently updated lucene9. Current FTBFS is caused by missing
lucene9 classes. Thus it seems that lucene9 API has changed breaking
backwards compatibility.
Andrius
Hi Nilson,
On Wed, 13 Mar 2024 17:34:15 + Nilson Silva
wrote:
Relevant part (hopefully):
> cc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=.
-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O
-DSYSPATHFILE=\"/usr
Hi Andreas,
On 2024-02-23 09:15, Andreas Tille wrote:
I've attempted to fix python-coverage-test-runner in Git since this
package is finally responsible for the failure of vmdb2:
File "/usr/lib/python3/dist-packages/CoverageTestRunner.py", line 22,
in
import imp
ModuleNotFoundError: No
On Thu, 8 Feb 2024 10:22:10 +0200 Andrius Merkys wrote:
I attach a patch which fixes the issue by setting -std=c++14 (as needed
by googletest) and commenting out a code line in
include/rapidjson/document.h which is gone in the newest upstream commit
[1].
[1]
https://github.com/Tencent
control: tags -1 + patch
On Fri, 14 Jul 2023 11:03:55 +0300 Adrian Bunk wrote:
Source: rapidjson
Version: 1.1.0+dfsg2-7.1
Severity: serious
Tags: ftbfs trixie sid
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/rapidjson.html
...
In file included from /usr/src/gtest/include
Hi Andreas,
On 2024-01-31 13:08, Andreas Tille wrote:
in connection with the time_t transition in Debian Med we are
discussing[1] whether we really need 32 bit support for some of our
tools or whether we should realistically drop this support to
concentrate on problems which are more relevant fo
Hi Yogeswaran,
On 2024-01-16 03:43, Yogeswaran Umasankar wrote:
I have removed the hard-coded version number from setup.py. I found that
the issue was due to changes in PEP440 version naming convention in
versioneer. For this package no need python3-versioneer, upstream has
its own versioneer.py
Hi Yogeswaran,
On 2024-01-14 18:46, Yogeswaran Umasankar wrote:
I created a patch for fixing AttributeError: module 'configparser' has
no attribute 'SafeConfigParser'. In the process I have updated it to the
latest upstream too. I’ve attached the debdiff for you to check out.
I noticed you hav
Hi,
On 2024-01-15 17:34, Christoph Berg wrote:
Re: Andrius Merkys
The patch proposed in #1042610 does not fix test failure. Interestingly, the
failure seems to be nondeterministic: after patching #1042610 some builds
succeed. However, I did not manage to find the root cause.
The difference
Hi,
On Tue, 12 Dec 2023 19:35:09 +0100 s3v wrote:
please see https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1042610
for a proposed patch.
The patch proposed in #1042610 does not fix test failure. Interestingly,
the failure seems to be nondeterministic: after patching #1042610 some
builds
Control: tags -1 + patch
Hello,
I can confirm that the provided patch (+B-D on python3-doc) fixes the
bug. However, #1054974 is not fixed, thus behave still FTBFS.
Andrius
Control: tags -1 + patch pending
Hi,
On 2023-12-21 00:42, Sebastian Ramacher wrote:
Source: dials
Version: 3.12.1+dfsg3-5
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
X-Debbugs-Cc: sramac...@debian.org
https://buildd.debian.org/st
Control: tags -1 + patch
Hi,
On 2023-12-20 20:23, s3v wrote:
After applying [1][2][3] from upstream and adding "-p no:warnings":
addopts = -p no:cacheprovider -p no:warnings
in ase/test/pytest.ini (DeprecationWarnings from various packages make
tests fail), I was able to build your pack
Control: tags -1 + patch
Hello,
On 2023-12-14 16:07, Vincent Lefevre wrote:
Package: liblatex-tounicode-perl
Version: 0.54-1
Severity: serious
As a consequence of the upgrade of texlive-bibtex-extra to
2023.20231207-3:
[...]
Selecting previously unselected package liblatex-tounicode-perl.
(Re
Hi,
On 2023-12-12 13:48, Graham Inggs wrote:
Source: prody
Version: 2.3.1+dfsg-3
Severity: serious
Tags: sid trixie
User: debian...@lists.debian.org
Usertags: regression
Hi Maintainer
The autopkgtest of prody 2.3.1+dfsg-3 is failing when tested with
numpy 1:1.24.2-2 [1]. I've copied what I ho
Control: owner -1 !
Hi,
On 2023-12-11 14:04, Santiago Vila wrote:
# Also happens in bookworm
found 1057951 3.2.1+ds-6
thanks
El 11/12/23 a las 12:06, Andrius Merkys escribió:
I can reproduce this in clean chroot on barriere.d.o. Interestingly,
FTBFS happens only when building on two threads
Control: tags -1 + confirmed
Hi,
On 2023-12-10 22:51, Santiago Vila wrote:
Package: src:promod3
Version: 3.3.1+ds-1
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
-
Control: owner -1 !
Hi,
On 2023-11-14 14:27, Gianfranco Costamagna wrote:
https://github.com/cod-developers/cod-tools/commit/2e9c0aaa367366883105fa9a7ba3d965495700f8
Just removing SPGCONST from the source.c file is enough, trivial patch
attached:
Sadly I opened an upstream PR before upstrea
Hi Pierre,
On 2023-11-08 12:14, Pierre Gruet wrote:
Thanks for the bug report. It was not easy to reproduce this one!
Interesting, I ran rebuild two times and both times it failed :) I
spotted this issue during ratt-rebuild of a bunch of other packages, did
not really give a decent look.
I
Hello,
On Thu, 02 Nov 2023 18:10:19 +0100 Pierre Gruet wrote:
Recently catch2/3.4.0-1 was uploaded to Debian, great. Yet the binary packages
do not follow the layout for libraries that is described in Policy Section 8.
For instance I think we should provide a shared library and if there are eno
Hello,
On Wed, 1 Nov 2023 11:49:20 +0100 Sebastian Ramacher
wrote:
Source: skeema
Version: 1.11.0+ds-1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
I am unable to reproduce this on eller. Most likely the test timeout is
due to
Finished generating test XML results (0.354 secs) into:
/home/merkys/htsjdk-3.0.5+dfsg/build/test-results/testWithDefaultReference
Generating HTML test report...
Finished generating test html results (0.42 secs) into:
/home/merkys/htsjdk-3.0.5+dfsg/build/reports/tests/testWithDefaultReference
s this particular build
issue, but one test case fails:
Failure:
IssueTest#test_issue_overdue_should_respect_user_timezone
[/home/merkys/redmine-5.0.4/test/unit/issue_test.rb:3381]:
Expected false to be truthy.
rails test test/unit/issue_test.rb:3359
Maybe it is worth to replace all '~>'
Hi,
On 2023-10-23 22:06, Bastien Roucariès wrote:
Source: fasttext
Source package names in Subject and Source do not match. Please retitle
if this is not intentional.
Best,
Andrius
Hi,
On 2023-10-23 22:04, Bastien Roucariès wrote:
Source: node-katex
Source package names in Subject and Source do not match. Please retitle
if this is not intentional.
Best,
Andrius
Source: prody
Version: 2.3.1+dfsg-3
Severity: serious
Justification: FTBFS
Tags: sid ftbfs
Forwarded: https://github.com/prody/ProDy/issues/1723
Hello,
prody FTBFS with python3-biopython > 1.79:
==
FAIL: testBuildMSAlocal
(pro
Control: tags -1 + unreproducible
On Tue, 26 Sep 2023 15:34:01 +0200 Lucas Nussbaum wrote:
Source: epics-base
Version: 7.0.7+dfsg1-5
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20230925 ftbfs-trixie
Hi,
During a rebuild of all packages
control: severity -1 normal
Hello,
In 0.0~git20230914.917f19d-1 I have excluded armel and armhf
architectures from the list of architectures asmjit is built upon. Thus
I think the severity should be normal now.
Andrius
Hi Emanuele,
On 2023-09-11 12:07, Emanuele Rocca wrote:
On 2023-09-09 08:38, Andrius Merkys wrote:
This is news to me. Could you please point out where in Debian Policy I can
read more about such requirement? I thought I saw packages dropping support
for one or another release architecture
Hi Emanuele,
On 2023-09-05 16:58, Emanuele Rocca wrote:
On 2023-08-28 07:42, Andrius Merkys wrote:
On Wed, 16 Aug 2023 14:29:10 +0200 Emanuele Rocca wrote:
asmjit does not build correctly on the following architectures:
armel, armhf, mips64el, mipsel, s390x.
Does this constitute an RC bug
Hi,
On Wed, 16 Aug 2023 14:29:10 +0200 Emanuele Rocca wrote:
asmjit does not build correctly on the following architectures:
armel, armhf, mips64el, mipsel, s390x.
Does this constitute an RC bug? If not, severity should be lowered.
Thanks,
Andrius
Hi Andreas,
On 2023-08-17 10:49, Andreas Tille wrote:
thanks for reporting this issue. You were mentioning you want to come
up with a patch. Since you seem to have dived into this issue deeper
I assume you will care for this bug. If not please clarify the status
(or may be set the "help" tag)
Package: provean
Version: 1.1.5+ds-2
Severity: serious
Hello,
Current provean package is broken: it segfaults while parsing the output
of cd-hit. The most recent compatible version of cd-hit seems to be
4.6.4-1. I hope to come up with a patch sooner or later.
Andrius
Hi,
On 2023-06-29 17:06, Paul Gevers wrote:
With a recent upload of gemmi the autopkgtest of finalcif fails in
testing when that autopkgtest is run with the binary packages of gemmi
from unstable. It passes when run with only packages from testing. In
tabular form:
pa
Hi Mikael,
On Wed, 28 Jun 2023, 10:09 Mikael Frykholm, wrote:
> > The upstream wishes to keep the package out of stable distributions for
> > now, until the NIST Post-Quantum Cryptography standardization project
> > reaches its conclusion
>
> Is this still true? Can this package be migrated to t
OP_SYS_INCLUDES passes the compilation:
override_dh_auto_build:
make LINKER_USE_RPATH=NO OP_SYS_INCLUDES=-I/usr/include/yajl
But I could not make the linker use the yajl library, arriving at the
following failure:
/usr/bin/g++ -o yajl_test
-L/home/merkys/epics-base-7.0.3.1/lib/linux-x86_64
Hello,
On 2023-06-25 21:15, Sebastian Ramacher wrote:
python-pdbfixer seems to need a sourceful upload due to the
python3-simtk => python3-openmm rename.
Sourceful upload does not seem to help: somewhy python3-pdbfixer picks
dependency on python3-simtk instead of python3-openmm. I guess this
Source: molmodel
Severity: serious
Version: 3.1.0-2
Hello,
molmodel FTBFS after recent update of gemmi to 0.6.2+ds-1:
/home/merkys/molmodel-3.1.0/src/PDBReader.cpp: In function
'gemmi::Structure getStructureFromFile(const std::string&)':
/home/merkys/molmodel-3.1.0/src/PDBRe
Source: macromoleculebuilder
Severity: serious
Version: 4.0.0+dfsg-2
Hello,
macromoleculebuilder FTBFS after recent update of gemmi to 0.6.2+ds-1:
/home/merkys/macromoleculebuilder-4.0.0+dfsg/src/CifOutput.cpp: In
function 'void SimTK::CIFOut::reWriteOutCif(const gemmi::Model&, c
Hello,
On 2023-02-28 12:57, Santiago Vila wrote:
Hello. Merely trying network access is already considered RC,
so this should really be serious.
(I would be willing to test a fix if somebody proposes one).
This particular test seems to attempt to communicate to a locally
running server daemo
Hi Santiago,
On 2023-02-06 19:36, Santiago Vila wrote:
This is fully reproducible at least on Hetzner virtual instances of type
CX21 and CX31.
Thanks for giving this a look. Could you please provide the versions of
python3-biopython and python3-numpy on your setup? ci.debian.net uses
the fol
Control: severity -1 important
Control: tags -1 + moreinfo unreproducible
Hello,
On 2023-01-27 13:40, Adrian Bunk wrote:
On Sat, Jan 14, 2023 at 01:42:10PM +0100, Lucas Nussbaum wrote:
Source: prody
Version: 2.3.1+dfsg-3
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu.
Control: tags -1 + pending
On Sat, 14 Jan 2023 13:54:02 +0100 Lucas Nussbaum
wrote:> > The following packages have unmet dependencies:
> sbuild-build-depends-main-dummy : Depends: python-numpy-doc but it is not
installable
> E: Unable to correct problems, you have held broken packages.
> apt
Control: tag -1 pending
Hello,
Bug #1026207 in python-ase reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:
https://salsa.debian.org/debichem-team/python-ase/-/commit/107cd838b53315dd7a0e
Hello,
On 2023-01-14 13:12, Rebecca N. Palmer wrote:
theano has been mostly abandoned upstream since 2018. (The Aesara fork
is not abandoned, but includes interface changes including the import
name, so would break reverse dependencies not specifically altered for it.)
Its reverse dependenci
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