convert matrix to angle
To: CCP4BB@JISCMAIL.AC.UK
Thanks a lot.
You are so kind.
On 7/7/07, *Kay Diederichs* <[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]>> wrote:
Jiamu Du schrieb:
> Dear all:
> I want to calculate the rota
Coot (and SSM) should give matrix - euler and polar angles! Paul? Eugene?
But if you do the superposition with lsqkab (superpose molecules - match
residues) then that gives all 3 ways.
Or use ROTMAT which converts everything to everything else.. ( rather
clumsy though..)
Eleanor
Jiamu D
On Sat, Jul 07, 2007 at 10:12:00PM +0800, Jiamu Du wrote:
> Dear all:
> I want to calculate the rotation angle between two similar domains. By using
> Coot, I can superposr the two domain and get the rotation matrix. But how to
> convert this matrix to an angle?
It's a one liner to call a clipper
t could someone explain what is meant
with 'angle between domains'?
Thx, br
-Original Message-
From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf
Of Das,
Debanu
Sent: Saturday, July 07, 2007 7:51 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matri
:23 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matrix to angle
In this connection I like to know how symmetry (in degrees and translation) is
calculated between two or more molecules in the asymmetric unit (A.U.).Suppose
if I download a PDB then I like to know the symmetry
In this connection I like to know how symmetry (in degrees and translation) is
calculated between two or more molecules in the asymmetric unit (A.U.).Suppose
if I download a PDB then I like to know the symmetry axis and center coordinate
of symmetry axis between two or more molecules in A.U. Th
CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matrix to angle
Jiamu Du schrieb:
> Dear all:
> I want to calculate the rotation angle between two similar domains. By
> using Coot, I can superposr the two domain and get the rotation matrix.
> But how to convert this matrix to an a
t 7/7/2007 8:21 PM
To: Das, Debanu; CCP4BB@JISCMAIL.AC.UK
Subject: RE: [ccp4bb] how to convert matrix to angle
Not that I want to open a can of worms here...
but could someone explain what is meant
with 'angle between domains'?
Thx, br
-Original Message-
From: CCP4 bulletin
CTED] On Behalf Of Das,
Debanu
Sent: Saturday, July 07, 2007 7:51 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matrix to angle
Hi,
You can also use LSQKAB in CCP4 to get the angle between two similar
domains.
-Debanu.
-Original Message-
From: CCP4 bulletin boa
ubject: Re: [ccp4bb] how to convert matrix to angle
Hi,
You can also use LSQKAB in CCP4 to get the angle between two similar
domains.
-Debanu.
-Original Message-
From: CCP4 bulletin board on behalf of Kay Diederichs
Sent: Sat 7/7/2007 7:30 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4
MAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matrix to angle
Hi,
You can also use LSQKAB in CCP4 to get the angle between two similar
domains.
-Debanu.
-Original Message-
From: CCP4 bulletin board on behalf of Kay Diederichs
Sent: Sat 7/7/2007 7:30 AM
To: CCP4BB@JISCMAIL.AC.UK
S
Hi,
You can also use LSQKAB in CCP4 to get the angle between two similar domains.
-Debanu.
-Original Message-
From: CCP4 bulletin board on behalf of Kay Diederichs
Sent: Sat 7/7/2007 7:30 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] how to convert matrix to angle
Jiamu Du
Thanks a lot.
You are so kind.
On 7/7/07, Kay Diederichs <[EMAIL PROTECTED]> wrote:
Jiamu Du schrieb:
> Dear all:
> I want to calculate the rotation angle between two similar domains. By
> using Coot, I can superposr the two domain and get the rotation matrix.
> But how to convert this matrix
Jiamu Du schrieb:
Dear all:
I want to calculate the rotation angle between two similar domains. By
using Coot, I can superposr the two domain and get the rotation matrix.
But how to convert this matrix to an angle. Is there any program can
calculate this ?
Thanks.
Jiamu Du,
If you have the
Dear all:
I want to calculate the rotation angle between two similar domains. By using
Coot, I can superposr the two domain and get the rotation matrix. But how to
convert this matrix to an angle. Is there any program can calculate this ?
Thanks.
--
Jiamu Du
State Key Laboratory of Molecular Bio
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