Thanks a lot.
You are so kind.


On 7/7/07, Kay Diederichs <[EMAIL PROTECTED]> wrote:

Jiamu Du schrieb:
> Dear all:
> I want to calculate the rotation angle between two similar domains. By
> using Coot, I can superposr the two domain and get the rotation matrix.
> But how to convert this matrix to an angle. Is there any program can
> calculate this ?
> Thanks.
>
Jiamu Du,

If you have the rotation matrix
a11 a12 a13
a21 a22 a23
a31 a32 a33

then

(a11 + a22 + a33 - 1) / 2

is the cosine of the angle you're looking for.

HTH,

Kay
--
Kay Diederichs              http://strucbio.biologie.uni-konstanz.de
email: [EMAIL PROTECTED]  Tel +49 7531 88 4049 Fax 3183
Fachbereich Biologie, Universität Konstanz, Box M647, D-78457 Konstanz





--
Jiamu Du
State Key Laboratory of Molecular Biology
Institute of Biochemistry and Cell Biology Shanghai Institutes for
Biological Sciences
Chinese Academy of Sciences (CAS)

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