Re: [ccp4bb] Protein crosslinking

2014-09-30 Thread Opher Gileadi
Dear Careina, First: make sure your solution is completely free of competing primary amines, e.g. tris buffer. Phosphate buffers or HEPES should be used; if you need buffer exchange, do it by gel filtration or extensive dialysis (2-3 changes), not concentration-dilution. Second: Try to use BS3,

[ccp4bb] Protein crosslinking

2014-09-30 Thread Careina Edgooms
Dear CCP4 members I do not have any good experience with chemical cross linking, it has not worked for me and I am curious how others have got it to work. In my latest attempt I wished to crosslink two monomers with DSS. The protein is exclusively dimeric according to SEC. I incubated the prote

Re: [ccp4bb] Protein crosslinking before crystallization

2011-08-17 Thread Opher Gileadi
Thanks all for the comments. I was thinking of crosslinking a protein that hasn't crystallized. Cystein engineering seems a good idea but depends on the availability of a good model. We'll be trying mild crosslinking using bifunctional reagents of various lengths (I suspect glutaraldehyde will n

Re: [ccp4bb] Protein crosslinking before crystallization

2011-08-15 Thread Katherine Rank
Hi Opher, I have a project where a protein was made 'cysless' and selective cysteines were introduced to allow for directed crosslinking using MTS and aldrithiol activated reagents (see Toronto Research Company and Pierce for a range of reagents of different lengths). A side product of these cr

Re: [ccp4bb] Protein crosslinking before crystallization

2011-08-15 Thread Jason C Porta
n board wrote: - To: CCP4BB@JISCMAIL.AC.UK From: Boaz Shaanan Sent by: CCP4 bulletin board Date: 08/15/2011 10:11AM Subject: Re: [ccp4bb] Protein crosslinking before crystallization Hi Opher, I seem to recall some old papers in which glutarldehyde was used (in the RESERVOIR only) in or

Re: [ccp4bb] Protein crosslinking before crystallization

2011-08-15 Thread Boaz Shaanan
CP4BB@JISCMAIL.AC.UK] on behalf of Opher Gileadi [opher.gile...@sgc.ox.ac.uk] Sent: Monday, August 15, 2011 5:56 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Protein crosslinking before crystallization Hi all Does anyone have experience or insights on intramolecular crosslinking of proteins b

[ccp4bb] Protein crosslinking before crystallization

2011-08-15 Thread Opher Gileadi
Hi all Does anyone have experience or insights on intramolecular crosslinking of proteins before crystallization? The idea is to lock a felxible (multidomain) protein into a restricted conformation. Thanks, Opher