Re: [ccp4bb] Map superposition!

2023-01-27 Thread Subramanian, Ramaswamy
Hi Pavel, This worked like magic. Thanks. Rams subra...@purdue.edu On Jan 25, 2023, at 11:06 AM, Pavel Afonine wrote: External Email: Use caution with attachments, links, or sharing data Hi Rams, phenix.match_maps will superpose maps and models. Totally general: target/moving

Re: [ccp4bb] Map superposition!

2023-01-25 Thread Pietro Roversi
Thank you Pavel, very useful. I imagine I have to invert the hand *beforehand* if it is not the correct one :-) Just saying - checking hand and picking the better one would be a nice feature to implement in this tool. P On 25-01-2023 17:06, Pavel Afonine wrote: Hi Rams, phenix.match_map

Re: [ccp4bb] Map superposition!

2023-01-25 Thread Pavel Afonine
Hi Rams, phenix.match_maps will superpose maps and models. Totally general: target/moving boxes (unit cells) and symmetry can be different, gridding can be different too. I can help off list should you need any assistance! Pavel On Wed, Jan 25, 2023 at 6:30 AM Subramanian, Ramaswamy wrote:

Re: [ccp4bb] Map superposition!

2023-01-25 Thread Bruno KLAHOLZ
Of Subramanian, Ramaswamy Sent: 25 January 2023 15:30 To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] Map superposition! Hi All, I have two maps - both cryo-EM. One with and one without ligand. I am trying to superpose them and I cannot seem to get ChimeraX to work. I then tried VESPER and that als

[ccp4bb] Map superposition!

2023-01-25 Thread Subramanian, Ramaswamy
Hi All, I have two maps - both cryo-EM. One with and one without ligand. I am trying to superpose them and I cannot seem to get ChimeraX to work. I then tried VESPER and that also does not work. The built models superpose very well. What is the best way to superpose maps. Thank you. Rams